Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1773 ATGAGAATTATCAACGAGCCAACTGTTGTTGCCTACAGCTTAGACAAGAAGGCCTCTAAAACTGGCGAGAAGAACGTCCTCATCTTTGACCTCGGGGGCGGCACCTTTGATGTGTCTCTCTTGACTATCGAGAAGGGCATCTTTGAGGTGAAGGCCACTGCCGGAGACACCCACTTAGGGGGCGAGGATTTCGACAACAGGCTGGTGAATCACTTCGCGGCGGAGTTCAAGAGGAAGCACAAGAAGGACATGAGCAGCAACGCGAGGGCGCTCCGGAGACTGAGGACAGCACGACCATCGAGATCGACTCGCTCTTTGAAGGGATTGATTTCTACGCGACCATCACTCTGGCCAGGTTCGAGGAACTCAACATGGACCTGTTCAGGAAATGCCAAGGTTGATAAGGTTCAGATTCACGATATTGTCCTTGTTGGCGGCTCCACCAGAATCCCAAGGGAGCTCTGCAAGAACATCAACCCCGACGAGGCCGTGGCTTACGAGGCTGCTGTTCAAGCTGCCATCCTGAGCGGCGAAGGCGACCAGAAAGTCCAAGACTTGCTTCTTCTCGACGTCACGCCCCTCAGCCTGGGCATTAAAACCGTCGGTGGGGTGATGACGGTCTTGATTCTCAGGAATACCACCATATCTACCAAGAAAGAGAAGGTGTTCTCGACCTACTCGGACAACCAGACCAGCGTGACCAAGGACAACAACCTTCTGGGAACATTTGAGCTCAAGGGGATTCTGCCAGCGCCGAGAGGGGTGCCTCAGATCAACGTGTGCTTCGACATCGATGCCAATGGCATCTTGAACATGTCTGCGGAGGACAAGACGACGAAGAACAAGATCACCATCACTAACAACAAAGGAAGGCTGAGCAAAGAGGAGATTGAAAGAATGGTGAGGTTTTCTGTGCATGAACCTCCTCCAGAGTTAGAATCATATCTGTACCAGCAAAGTCATTTATCGTCGCTCCAACACAAATTAAAGAAGCTTCTTTATCTCAAGCAAGTAATCGCAAATCAAACCTTCTTTCTTCGTGTTTACTAG 1050 0.5076 MRIINEPTVVAYSLDKKASKTGEKNVLIFDLGGGTFDVSLLTIEKGIFEVKATAGDTHLGGEDFDNRLVNHFAAEFKRKHKKDMSSNARALRRLRTARPSRSTRSLKGLISTRPSLWPGSRNSTWTCSGNAKVDKVQIHDIVLVGGSTRIPRELCKNINPDEAVAYEAAVQAAILSGEGDQKVQDLLLLDVTPLSLGIKTVGGVMTVLILRNTTISTKKEKVFSTYSDNQTSVTKDNNLLGTFELKGILPAPRGVPQINVCFDIDANGILNMSAEDKTTKNKITITNNKGRLSKEEIERMVRFSVHEPPPELESYLYQQSHLSSLQHKLKKLLYLKQVIANQTFFLRVY* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1773 349 PANTHER HEAT SHOCK PROTEIN 70KDA 126 302 IPR013126 GO:0005524|GO:0140662
Amo04g1773 349 PANTHER HEAT SHOCK PROTEIN 70KDA 1 107 IPR013126 GO:0005524|GO:0140662
Amo04g1773 349 Gene3D - 17 59 - -
Amo04g1773 349 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 126 302 - -
Amo04g1773 349 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 1 107 - -
Amo04g1773 349 PRINTS 70kDa heat shock protein signature 34 44 - -
Amo04g1773 349 PRINTS 70kDa heat shock protein signature 255 271 - -
Amo04g1773 349 Pfam Hsp70 protein 1 97 IPR013126 GO:0005524|GO:0140662
Amo04g1773 349 Pfam Hsp70 protein 130 302 IPR013126 GO:0005524|GO:0140662
Amo04g1773 349 Gene3D - 156 172 - -
Amo04g1773 349 Gene3D - 1 16 - -
Amo04g1773 349 Gene3D Actin; Chain A, domain 4 60 97 - -
Amo04g1773 349 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 173 333 IPR029047 -
Amo04g1773 349 SUPERFAMILY Actin-like ATPase domain 21 177 IPR043129 -
Amo04g1773 349 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 182 302 IPR029047 -
Amo04g1773 349 ProSitePatterns Heat shock hsp70 proteins family signature 2. 28 41 IPR018181 -
Amo04g1773 349 Gene3D - 129 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1773 Amo-Chr4 82899485 82901120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1773 1 302 Calmodulin-binding Proteins AT3G12580 66.667 9.45e-150 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1773 K03283 - pvy:116132172 392.119