Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1761 ATGGCGAGCGCATACCAAGAGCAACTACCGGCATCACCGGACTGGCTAAACAAAGGCGACAACGCATGGCAGATGACGGCGGCCACACTCGTCGGCCTCCAAAGCATGCCGGGACTGGTTATACTCTACGCAAGCATAGTAAAGAAGAAATGGGCTGTCAATTCGGCTTTCATGGCTCTCTATGCTTTTGCAGCGGTTCTAATATGTTGGGTCCTTGTGTGCTATCGCATGGCCTTCGGTGACCAGCTTCTTCCATTTTGGGGGAAAGGAGCACCAGCACTAGGTCAAAAGTACCTAATAGGACAAGCCAAGGTTCCTGAAACCGCTCATTATTACAAAAATGGTAAACTTGAGAAGGCTATGGAGACACCCTTTTTCCCTATGGCTTCCRTTGTGTATTTTCAGTTCACTTTTGCGGCAATAACAATGATCTTGCTGGCTGGTTCTGTTCTTGGGCGCATGAACATCAAGGCTTGGATGGCTTTTGTGCCTCTTTGGCTCATATTTTCTTACACTGTTGGTGCTTTCAGCCTCTGGGGTGGTGGCTTTCTTTATCACTGGGGTGTTATTGATTACTCAGGTGGCTATGTTATTCATCTTTCATCTGGAATTGCTGGATTCACTGCTGCTTATTGGGTTGGGCCAAGGCTGAAGAGTGATAGAGAAAGGTTCCCGCCAAACAACGTGCTACTTATGCTTGCGGGAGCAGGGTTGCTGTGGATGGGGTGGTCAGGGTTCAATGGAGGTGCACCGTACGCCGCAAACACAGCGTCGTCGATTGCTGTGTTGAACACTAACATATGTGCGGCCACTAGCCTCCTTGTGTGGACCTCTCTTGATGTTTCTTTCTTTGGGAAGCCCTCTGTCGTTGGCGCTGTTCAGGGTATGATGACTGGACTTGTGTGCATCACCCCTGGTGCAGGGCTTGTGCAATCGTGGGCGGCTATAGTGATGGGAATGCTATCTGGAAGCATTCCGTGGGTCTCAATGATGATTCTTCACAAAAAGTCAAGCCTCCTTCAGAAGGTAGATGACACCCTAGGTGTATTTCATACACATGCAGTAGCTGGCCTATTGGGTGGGCTTCTCACAGGTCTCTTCGCAGAACCAACACTTTGCAACCTGCTACTACCGGTAACCAATTCAAGAGGTGCATTCTATGGTGGTAATGGTGGTGTTCAGTTCCTAAAACAATTGGTTGCAGCATTGTTCGTAATTGGTTGGAACTTGGTCTCAACCACCATAATTCTTCTCGTCATCCAATTGTTCATACCTTTGAGGATGCCTGATGAGCAACTTGAGATTGGTGATGACGCTGTTCATGGTGAAGAAGCTTATGCACTTTGGGGTGATGGTGAAAAATATGATCCTACAAGGCATGGGACACAAAATAATAATGGCAATTCTTCTGTTTCACCTTATGTTAGTGGTGCAAGAGGTGTCACCATCAATTTGTGA 1458 0.476 MASAYQEQLPASPDWLNKGDNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLIGQAKVPETAHYYKNGKLEKAMETPFFPMASXVYFQFTFAAITMILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANTASSIAVLNTNICAATSLLVWTSLDVSFFGKPSVVGAVQGMMTGLVCITPGAGLVQSWAAIVMGMLSGSIPWVSMMILHKKSSLLQKVDDTLGVFHTHAVAGLLGGLLTGLFAEPTLCNLLLPVTNSRGAFYGGNGGVQFLKQLVAALFVIGWNLVSTTIILLVIQLFIPLRMPDEQLEIGDDAVHGEEAYALWGDGEKYDPTRHGTQNNNGNSSVSPYVSGARGVTINL* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1761 485 Gene3D Ammonium transporter AmtB like domains 2 449 IPR029020 -
Amo04g1761 485 PRINTS Rhesus blood group protein signature 261 283 IPR002229 GO:0005887
Amo04g1761 485 PRINTS Rhesus blood group protein signature 230 248 IPR002229 GO:0005887
Amo04g1761 485 PRINTS Rhesus blood group protein signature 316 334 IPR002229 GO:0005887
Amo04g1761 485 PRINTS Rhesus blood group protein signature 135 151 IPR002229 GO:0005887
Amo04g1761 485 MobiDBLite consensus disorder prediction 451 471 - -
Amo04g1761 485 PANTHER AMMONIUM TRANSPORTER MEP2 3 482 IPR001905 GO:0008519|GO:0016020|GO:0072488
Amo04g1761 485 PANTHER AMMONIUM TRANSPORTER 3 482 - -
Amo04g1761 485 SUPERFAMILY Ammonium transporter 15 428 - -
Amo04g1761 485 Pfam Ammonium Transporter Family 22 446 IPR024041 GO:0008519|GO:0016020|GO:0072488
Amo04g1761 485 ProSitePatterns Ammonium transporters signature. 191 216 IPR018047 GO:0008519|GO:0016020|GO:0072488
Amo04g1761 485 TIGRFAM amt: ammonium transporter 20 446 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1761 Amo-Chr4 82560977 82567386 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1761 128 485 Inorganic Solute Cotransporters AT2G38290 77.994 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1761 K03320 - gmx:100790119 863.218