Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1760 ATGGAAGAGGTTCTTGGGTGCTGGATGGAAGGCGCATTTGCGGATGAGGCGGTATTGGATGGAGTGAGTGAAAGGGTGGGGGACGTTGCCTTCGAAGAGGAAATAGCACAACATATGGGAATGAAAGATGATGACGTTGAGGTAGCTGGAGGACAGCAAAGTGTTGAGAATGTAATGGACGCTGCTGAAGTTACGACAATAACGGCTGATGATTTTTTGCGAATGGAGTTCAACAATCCTAAGGAAGCTGCTCGTATATATGAAGAGTACAGTCGGGTGAAGGGTTTTGCTGTTCGACAAGGTTTTCGGGACAAGAAATGGTTAGAAAAGCAGGATCACAAAAGAGAGCACAAGGTTGTCACCCGTTGTGGGTGTCCTGCCGAGATGCGGATAAAGTCAAGGATTGTCACAGGAAAGTGGTTTGTGGCACGTTTTGTGGATGACCATAACCATCATCTTTTGCCTGAAAAGTTTTGGAGTACTTGCCTGCGCACAGGAGGAGATGTCATAAGCATAAAATTCTTTAAGCATGTGTCATATGCTGGCAATGAAAGCAACAACCGTCGAACAAGAGTATGCTAA 582 0.457 MEEVLGCWMEGAFADEAVLDGVSERVGDVAFEEEIAQHMGMKDDDVEVAGGQQSVENVMDAAEVTTITADDFLRMEFNNPKEAARIYEEYSRVKGFAVRQGFRDKKWLEKQDHKREHKVVTRCGCPAEMRIKSRIVTGKWFVARFVDDHNHHLLPEKFWSTCLRTGGDVISIKFFKHVSYAGNESNNRRTRVC* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1760 193 Pfam FAR1 DNA-binding domain 98 155 IPR004330 -
Amo04g1760 193 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 99 156 - -
Amo04g1760 193 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 99 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1760 Amo-Chr4 82539346 82540172 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo04g1760 FAR1 1.9e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1760 - - ahf:112750035 271.166