Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1741 ATGGATGATTCAATCTCAGATTGTCAGCTGAATCAGGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGTCTCTCTTTGTTGTTGATGACCAGTTTGTTCCGAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCTAAGGCTGCATGTTTTTCTACAAGAGTTCGGAGCACAAATAGGAAGGGAAACGAGATTAAGAATCAATTGATTACATGTAGCAGAGAGGGAAAATGGAAATATAAAATATCTCCGACCGAGAAGACGAATCCGACAACCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTTGGTGCTTGGATCATTACAAAGCTTGGTTTCTGCCTGCCATTTTTTCTGAAATGA 411 0.3966 MDDSISDCQLNQGEVDYEFESNEVPESLFVVDDQFVPKVGMTFTTLEDAGKFYRNYAKAACFSTRVRSTNRKGNEIKNQLITCSREGKWKYKISPTEKTNPTTGLNCPARIYIHTLKDVGAWIITKLGFCLPFFLK* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1741 136 Pfam FAR1 DNA-binding domain 51 127 IPR004330 -
Amo04g1741 136 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1741 Amo-Chr4 82022562 82024652 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo04g1741 FAR1 4.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1741 - - adu:110278638 225.713