Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1728 ATGCCAGAACCTTCATCCTTCAAAGTTGTGCAAGTTTGTTCTGTTTCACCACCGCCACAAAATGGAACAACAACAACTTCTCCAACCTCTATACCGCTCACCTTCTTAGACATATTATGGCTACGGTTCCCACCCGTTGAGCGTCTTTTCTTCTTCGAATTCCCAAACTACCCTTCTTCTAATTCGTTCTACGACTCTGTTCTTCCATATCTTAAACACTCTCTTTCCCTCACACTCCAACACTTCCTTCCCCTCGTTGGTAACATTATTTGGCCTTTAGACTCTCCCAAACCGATGATTCATTATGTCCCTAATGAAGATTCTGTTACCTTAACCATAGCAGAGTCTAATGATCACGATGTTAACGTTTTTGATCAACTTTGTTCTAATTTATGTGATGCTTCACAACGTTATTTCTTGATACCCCAATTGGCCAATTCTCATGAAAAAGCTTCTTTGTTAGCGTTACAAGTAACTTTGTTCCCAAAGTTCGGATTTTGCGTTGGAATTTCAACACACCATGCAGCCATGGATGGAAAGTCTTCAACTTTGTTTATGAAAGCATGGTCCTACACATGCTCCAAGCTATTAGAATCACCATCTTTTCCATCATCGCTACCATTACCTGAGAATCTAACACCATTTTTGGATAGGTCAGTGATAAGGGACCCAACAAAAATTGGTGAAGCTTATGCAGATTCATGGATGAATCATGGTGGAACAAATAACCGAAGTCTCAAAGTGTGGGATTTTCCTAATGAGTTTGCAAAAGAAGGATATGGGGTTAAGGCGTTGTTTGAATTGAACCCCACACAGATCATGAAGCTCAAGGAACATGCAAAATTCAAGATGGGAGGATCAAAAAGTGTGAAACTTTCAAGTTTTTCGGTTACTTGTGCTTATGTATTATCATGTTTGGTTAAAACAGAAGAGCAACACTTGTTGAAAAACGCGGTTGAAAGAGTGTTCCTTATTTTTAGTGTGGATTGTAGAACAAGGTTAGACCCTCCAATTGTTTCAACATATTTTGGGAATTGCGTTGCTGGAGAAAAGGTTGAGGCAGAGACAAAAGGGATACTGTTGGGAAACAATGATGGATTCATCGTTGCTTTGAAAGGAATCATTGAAGCATTGAAAAGGGTTGAAGATGGGTTAGTAATGAATGGAGCAGAGTCTTGGTTTGAGGATATGCGAAATTTTGCTGATAAAGCAAAGATATATTCCATTGCTGGATCTCCTAGGTTTGGAGTTTATGATGTTGATTTTGGTTATGCAAAGCCTAAGAAAGTGGATATGACTTCAACGGACAAGACAGGAGCTTTTTCTCTTTCGGAGAATAAGGATAACAATGGTGGAATAGAGATTGGGTTGGCATTGAAAAAAAGTGACATGGAAACTTTCTCTACGTTTTTCAGTGAAGGACTTCAATCCTTGTTCGCACAGGTAATTATAATAAGGTGGATGCTACGGTAA 1473 0.3924 MPEPSSFKVVQVCSVSPPPQNGTTTTSPTSIPLTFLDILWLRFPPVERLFFFEFPNYPSSNSFYDSVLPYLKHSLSLTLQHFLPLVGNIIWPLDSPKPMIHYVPNEDSVTLTIAESNDHDVNVFDQLCSNLCDASQRYFLIPQLANSHEKASLLALQVTLFPKFGFCVGISTHHAAMDGKSSTLFMKAWSYTCSKLLESPSFPSSLPLPENLTPFLDRSVIRDPTKIGEAYADSWMNHGGTNNRSLKVWDFPNEFAKEGYGVKALFELNPTQIMKLKEHAKFKMGGSKSVKLSSFSVTCAYVLSCLVKTEEQHLLKNAVERVFLIFSVDCRTRLDPPIVSTYFGNCVAGEKVEAETKGILLGNNDGFIVALKGIIEALKRVEDGLVMNGAESWFEDMRNFADKAKIYSIAGSPRFGVYDVDFGYAKPKKVDMTSTDKTGAFSLSENKDNNGGIEIGLALKKSDMETFSTFFSEGLQSLFAQVIIIRWMLR* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1728 490 PANTHER - 1 478 - -
Amo04g1728 490 Gene3D - 7 246 IPR023213 -
Amo04g1728 490 Pfam Transferase family 28 469 - -
Amo04g1728 490 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 1 478 - -
Amo04g1728 490 Gene3D - 261 478 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1728 Amo-Chr4 81583210 81585303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1728 59 473 Monolignol Biosynthesis Gene Families AT5G48930 26.230 1.18e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1728 - - adu:107484981 932.554