Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1713 ATGGAAAGTCATCATCTCCATCATCATCATCGTCAACAACAATACCCACCGCCACAACGTCATAATATTAGTGCAGCAACAACAACGAGTGCAGGAACTAATAACAACGTTGTGGTTGTTGATGTGACAGGAGATAGTAGGTTCCCTCAATGGAGCATCCAAGAAACAAAGGAGTTCCTAATGATCCGTGCYGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAGCAGCTCTGGGAAGTCATCTCCAACACCATGAAAGAAAAGGGTTSCCATCGAAGCGCTGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACCCGTTATAAGGGATGTGAAACGATGGAGGCAGAAGCAATGAGGCAGCAATTCCCATTCTACAACGAGCTTCAAGCTATCTTCACCGATAGAATGCAGAGGATGCTTTGGGCCGAAGCAGAAGGCGGAGGCGGAGGCGGAGGAGGAGGAGGAGGTTCTTCTACTAACAAGAAGAAAGCTGCGACGGCGCAGCTGTCTTCGGACGAKGAAGAAGAGGAAGAGAGCGAATTAGGAGATCCTCAACAAAAGAATGTAAAYAGAAAGAAAAGATTAAAGAAGGTTAAGAGGGTGGAAGATAGTGGTGGTGCGAGTAATTTGAAGCATCTGAAGGGGATTCTGGAGGAGTTTATGAGGCAACAGATGGAGATGGAGGCGCAATGGATGTCGGCATTCGAGGCGAGGGAGAATGATCGGAGGTTGAAGGAGTTGGAATGGAGGCAGACAATGGAGGCTTTGGAGAATCAGAGGATYATGATGGAGCAGAGATGGAGGGAGAGTGAAGAACAATGGAGGATTAGGGAAGAAGKTAGGGCTCATAAGAGAGATGCTCTTATCACTGCACTTCTCAACAAGCTTTCAAGACAACAAGATCAATAA 918 0.4651 MESHHLHHHHRQQQYPPPQRHNISAATTTSAGTNNNVVVVDVTGDSRFPQWSIQETKEFLMIRAELDQTFMETKRNKQLWEVISNTMKEKGXHRSAEQCKCKWKNLVTRYKGCETMEAEAMRQQFPFYNELQAIFTDRMQRMLWAEAEGGGGGGGGGGGSSTNKKKAATAQLSSDXEEEEESELGDPQQKNVNRKKRLKKVKRVEDSGGASNLKHLKGILEEFMRQQMEMEAQWMSAFEARENDRRLKELEWRQTMEALENQRIMMEQRWRESEEQWRIREEXRAHKRDALITALLNKLSRQQDQ* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1713 305 Coils Coil 256 276 - -
Amo04g1713 305 MobiDBLite consensus disorder prediction 1 30 - -
Amo04g1713 305 Pfam Myb/SANT-like DNA-binding domain 50 134 IPR044822 -
Amo04g1713 305 Gene3D - 51 112 - -
Amo04g1713 305 MobiDBLite consensus disorder prediction 1 15 - -
Amo04g1713 305 ProSiteProfiles Myb-like domain profile. 51 107 IPR001005 -
Amo04g1713 305 MobiDBLite consensus disorder prediction 146 203 - -
Amo04g1713 305 CDD GT1 49 114 - -
Amo04g1713 305 MobiDBLite consensus disorder prediction 16 30 - -
Amo04g1713 305 PANTHER - 2 302 - -
Amo04g1713 305 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 2 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1713 Amo-Chr4 81077156 81078817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1713 7 301 Trihelix Transcription Factor Family AT2G38250 52.203 3.64e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Amo04g1713 Myb_DNA-bind_4 4.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1713 - - aip:107637926 499.975