Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1705 ATGGCAGAATCGCAAGAAGAACGTGTTTCAAGCGAGGATCCTCCTTTATGCACTTCACCTAGCCAAAATTCATTAATGGAGGTCGATATAGTGGAACCGCTAGATTGTGTAGCCTCTGACGTTTCAGAAAATTTATCATACGAACAAGAAAACTTAGCCGGCAATGTTGCAGGCCATGGTCACAAGTCGAACAAAGCCACGCAATTGTCGGATGTTACAGATGTTGGAAGTGAAGAGATGGAGCTTGTTGATGAGATGGCTCATGACTTTTATGTGACCTATGCAAAGAAAGCTGGATTTACAACTAAGATAAGGACGACAACATTTGATAAGATCACAAAGGCTCCCATTAACCAAGCTATACACTGTAATCGCGACGGGATCCGTGAGTCTCGTGTTAAAGCACCAACGCGGAAGAATACGATTTCAGCTACTGGGTGCAAAGCAATGATATATGTAAAGTTTGATAAAGACGTGCAAGACTGGATTTTGCTCAAGGTTGACTTGACGCACTCTCACCCCTGTTCACCAAAAAAGGCAGTGCACTACCATGAGTATGGGCAACTGACTATGCATGAGAAGTGCGTGATCGAGGATAATGATAAGGCTGAGATTCGACCAAACAAGACATTCCTTGCTTTGTCAAATGAGACTGGTGGCCCCTCTAACTTGGGATTCTCAGAGAAGGATTTAAGAAATTATATAACAGCAAGGCTCTGA 720 0.4319 MAESQEERVSSEDPPLCTSPSQNSLMEVDIVEPLDCVASDVSENLSYEQENLAGNVAGHGHKSNKATQLSDVTDVGSEEMELVDEMAHDFYVTYAKKAGFTTKIRTTTFDKITKAPINQAIHCNRDGIRESRVKAPTRKNTISATGCKAMIYVKFDKDVQDWILLKVDLTHSHPCSPKKAVHYHEYGQLTMHEKCVIEDNDKAEIRPNKTFLALSNETGGPSNLGFSEKDLRNYITARL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1705 239 Pfam FAR1 DNA-binding domain 89 176 IPR004330 -
Amo04g1705 239 MobiDBLite consensus disorder prediction 1 22 - -
Amo04g1705 239 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 73 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1705 Amo-Chr4 80866691 80868705 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo04g1705 FAR1 1.3e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1705 - - ahf:112778726 427.172