Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1668 ATGTCGTCGAAATGCAGCAAGATTCGCCACATTGTGAGGCTTCGTCAGATGCTGCGTCGCTGGCGCATCAAGGCGCGCATGTCCTCCGCTGCTAATAACCGCTCAAGCTCTTCTCCGCCGTCTGATGTTCCCGCTGGACACGTGGCGGTCTGCGTCGGCATCAACTGCACCAGATTCGTTGTGCGAGCTACTCACCTTAACCACCCTGTGTTCCAGAAGCTTCTAGTTCAGGCGGAAGAAGAGTACGGCTTCGCCAACCACGGTCCTTTGGCTATTCCCTGCGACGAAGCACTCTTTGAAGATGTTATCCGGTTCATTTCCCGCTCTGAGTCTGGATCCGGTTCGAACCGATTCTTGAACCTTGATGACTCTCAGAGACACTGCCACGTCGGAATGAGGAACAACCTTGATTTCTGGAAGCAGGAATCTCGACCGCTGCTCCACGGCTTCACTGACAAGACCATTTGGTAG 471 0.5414 MSSKCSKIRHIVRLRQMLRRWRIKARMSSAANNRSSSSPPSDVPAGHVAVCVGINCTRFVVRATHLNHPVFQKLLVQAEEEYGFANHGPLAIPCDEALFEDVIRFISRSESGSGSNRFLNLDDSQRHCHVGMRNNLDFWKQESRPLLHGFTDKTIW* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1668 156 PANTHER SMALL AUXIN-UP RNA-RELATED 4 149 - -
Amo04g1668 156 Pfam Auxin responsive protein 13 105 IPR003676 GO:0009733
Amo04g1668 156 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 149 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1668 Amo-Chr4 79593847 79595120 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1668 4 155 Calmodulin-binding Proteins AT4G34750 54.140 2.67e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1668 K14488 - qsu:112012848 231.876