Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1650 ATGACCGAACACAACAACACTTATAATTTTACGGGTAYCAATACTACCTATTCAGCTCCTTTTTCTCTTCATTTTTCTTCCTGGGGTTTTCTTCTTGATCCTGCAAAGTGCAGCACACTGAATCTGCAAGAGAAACAGAAGCTAGTCCATGAGATTGCTCGCCAGTCAAAAGATGCTCCGAGTATGCTCCGATCCCTAACACGCAGGGAACTTCTGGAAATAATTTGTGCTGAATTAGGCAAAGAGAGGAAGTACACGGGATATACCAAAAATCAAATGATTGAGTATCTTCTTAAGATTATTTCAAGGAATTCCAAGTTGCATGTAACCCAAAATACTCTTGCCCATTCTCCGTCGAAAAGGAAAAAAGGACCTGCATCTCAAGATTTGGATCATGATTCTCCTGAGGATAGTAAAGACGAAATACTGAAAGTCTTATTGTGTCAAAATGTTGCTTGTAAAGCTACTTTGAATCCAGAAGATTCTTTTTGCAAGAGATGTTCTTGCTGCATTTGTCATTGCTATGACGATAACAAGGACCCCAGTTTGTGGTTGACTTGCACCAATGAGGAATCATGTGGAATGTCATGCCATTTACGATGTGCTTTGAGTAATCAGTTGTCTGGAATTTTGAAGAGCAGTTTTGGTGTAAAGTTAGAAGGAGCCTTCTTTTGTGTTTCTTGCGGAAAAATTAATGAATTAATGAGCACATGGCGTAAACAGTTATTGGTTGCCAAAGAAGCTAGAAGAGTAGATATACTCACTTTGCGAATAACGTTGGCTCACAGAATTCTTATTGGAACAGAAATATACAATGAAATACAAAAGATTGTTGAAACTGCTCTCAAGTTATTGGATAATGAAGTGGGACCTCTGGATAATGTATGTGCAAGCATGACCCGCGGTATTGTGAGCAGGCTCTATTGTGGTGCTGAGGTTCAGAAGTTGTGCTCCAATGCAATTGAATGTTTTGATCTAAAGTTTTCTAATATCTTCCATAGTCATGTGGAGAAGAAAGACACACCAACATGCTCCATACGTTTTGAAGAGTGTCTTCCTACATCCGTGGTTCTTGTTCTTGAATATGATGATAAACTTCTGAARAACTTTCTAGGYTGCAGGCTTTGGCACCGAATGTCAACAACRGSGTACCCTGAACAACCCACCTTTATTGTTTTAAGGCCTGAGAAAAGATTCAAATTAGAAAATCTCCTTCCTTCAACTGAGTACTTCTGCAAGGCTTCTCTATTCAGCAGCATTGGGATTTTGGGTGCTGCTGAAGCTAAATGGGTSACACCTTGTGAGTCCGTGAATCCTCTTCCRAAYGTTATTAGGTGTGGTGGTAACCATTYATCACAGTCACCTCAGAGATCCCCAGTGATAGGTATGCACAAATTTTCACAGRGAATGATCAAGACAAATGCTGAAAATCATCCAGTAGAATCTGCCAACTCTCACATCAGGGGCAGCTTTGAGGAGTTCCTAACTCGGACTCCCTCAGTCGTACCATTTTCACATAAAACTTCAGTTGCGGTTTCACCTCCAACGCCTTCTAAACCCAATGAAATGAGGCAACTCSGTGCTTTGSTGCCGAGGAACCGTTTGAAGGAACATGATTATGAGCATTCCGTCAGGGTAGTCAAATGGTTAGAACACCAAGGGCACATTGACGAACTCTTCAGAATAAGGTTTCTCACATGGTTCAGCCTCAAGGCTACRCAGCAGGAGAGAAGAGTGGTYAGTGCTTTTGTCGATGCACTGATCGACGAGCCTTCAAGCTTAGCAGACCAGCTCGTACACACTTTCTCGGACGTGATATGTTCCGAGCAGAAACCTTAG 1839 0.4122 MTEHNNTYNFTGXNTTYSAPFSLHFSSWGFLLDPAKCSTLNLQEKQKLVHEIARQSKDAPSMLRSLTRRELLEIICAELGKERKYTGYTKNQMIEYLLKIISRNSKLHVTQNTLAHSPSKRKKGPASQDLDHDSPEDSKDEILKVLLCQNVACKATLNPEDSFCKRCSCCICHCYDDNKDPSLWLTCTNEESCGMSCHLRCALSNQLSGILKSSFGVKLEGAFFCVSCGKINELMSTWRKQLLVAKEARRVDILTLRITLAHRILIGTEIYNEIQKIVETALKLLDNEVGPLDNVCASMTRGIVSRLYCGAEVQKLCSNAIECFDLKFSNIFHSHVEKKDTPTCSIRFEECLPTSVVLVLEYDDKLLKNFLGCRLWHRMSTTXYPEQPTFIVLRPEKRFKLENLLPSTEYFCKASLFSSIGILGAAEAKWVTPCESVNPLPNVIRCGGNHXSQSPQRSPVIGMHKFSQXMIKTNAENHPVESANSHIRGSFEEFLTRTPSVVPFSHKTSVAVSPPTPSKPNEMRQLXALXPRNRLKEHDYEHSVRVVKWLEHQGHIDELFRIRFLTWFSLKATQQERRVVSAFVDALIDEPSSLADQLVHTFSDVICSEQKP* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1650 612 MobiDBLite consensus disorder prediction 122 136 - -
Amo04g1650 612 Pfam PHD - plant homeodomain finger protein 148 263 IPR032881 -
Amo04g1650 612 MobiDBLite consensus disorder prediction 112 136 - -
Amo04g1650 612 PANTHER VIN3-LIKE PROTEIN 2-RELATED 24 612 IPR044514 GO:0010048|GO:0040029
Amo04g1650 612 PANTHER OS08G0220600 PROTEIN 24 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1650 Amo-Chr4 78860604 78865432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1650 533 610 PHD Gene Family AT5G57380 48.718 7.65e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1650 - - gmx:100785502 870.922