Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1626 ATGAATAGAATAAACGCCTCTTATTCCGTTATTGAATTGCCATTTATAGCACCTCAAAAGCAAATCAGCAATGGAGGGAAACAAGAACGGGACACGGAGCCGCAACAAACACCGTTAAGCTTAAAAAGGATACAAATATGCCAATTAGAAATAAAGGATGTTACACATATTTCAAAGTCTTTTGGTTCGGAGTTTTTGTACTATTGTACACAAAACCAAACTCATGATAAATTAGTTGTGCCARTAGATGAGAGTAGCAGCAACCCTAATTACTTGGCATTTGTGATTTGGTACCAACAKGGAATTAGAGACATAACTGCTGTCCAGCTTTGTGAGACTGAGAATTTTGAGTGCAAGCTGCTAGATCGGAGCCATGGTGCAGTGTGGAGTAGCACCTGCGGCATTGATTGCATTGACAGTTGA 423 0.3972 MNRINASYSVIELPFIAPQKQISNGGKQERDTEPQQTPLSLKRIQICQLEIKDVTHISKSFGSEFLYYCTQNQTHDKLVVPXDESSSNPNYLAFVIWYQXGIRDITAVQLCETENFECKLLDRSHGAVWSSTCGIDCIDS* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1626 140 Pfam Expansin C-terminal domain 86 132 IPR007117 -
Amo04g1626 140 PANTHER EXPANSIN-B3 77 133 - -
Amo04g1626 140 Gene3D - 75 136 IPR036749 -
Amo04g1626 140 PANTHER POLLEN ALLERGEN ORY S 1, PUTATIVE-RELATED 77 133 - -
Amo04g1626 140 SUPERFAMILY PHL pollen allergen 85 133 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1626 Amo-Chr4 77550892 77555071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1626 77 129 Expansin Gene Family AT4G38400 41.509 3.95e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1626 - - gmx:100783848 94.3597