Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1609 ATGGAAAATCACACTATCATGTTGAAAAAGACAACAATTCTACCATTCTTAACCTGCAAGATTTGTGATGAAGTATTGGAGGATGCTACTGCCATTGATGATTGTCTTCATTTATTTTGCAGGAAGTGCATCCACCATAAAATTATTGAAGAGAAATTAGAACATTGTCCAGTTTGCTACCTAAATTTGGGATCTAAACCTCTCGAAAAATTGAGACAAGACAGAAATATGCAATCAATAAGGAATACAATTTTTCCTCCAAGAGAAAGAAATGTTGCTAATAAGACACATGATGATGTTGCCAATGTTGGGAAGAATGAATTATTAGGTGATTCTAAAAAGATGTCGCATCAAAAGATTTGCCAGATACTTCAAAAGAACATGGAGAATATTAAGGAGGTAAGAGAATGA 411 0.3358 MENHTIMLKKTTILPFLTCKICDEVLEDATAIDDCLHLFCRKCIHHKIIEEKLEHCPVCYLNLGSKPLEKLRQDRNMQSIRNTIFPPRERNVANKTHDDVANVGKNELLGDSKKMSHQKICQILQKNMENIKEVRE* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1609 136 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 6 95 IPR044807 GO:0004842
Amo04g1609 136 Pfam Zinc finger, C3HC4 type (RING finger) 19 59 - -
Amo04g1609 136 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 7 103 IPR013083 -
Amo04g1609 136 ProSiteProfiles Zinc finger RING-type profile. 19 59 IPR001841 -
Amo04g1609 136 ProSitePatterns Zinc finger RING-type signature. 35 44 IPR017907 -
Amo04g1609 136 SMART ring_2 19 59 IPR001841 -
Amo04g1609 136 SUPERFAMILY RING/U-box 13 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1609 Amo-Chr4 76925314 76927691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1609 1 86 C3H Transcription Factor Family AT2G30580 49.425 2.84e-26 99.0