Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1592 ATGGCAACTACAACTACTGAGCTAGGGTTTCTGAGGAAGGGATCGTTGAAACAATTCATAATGATGACAATGATGAAGCGCCCGATGCTGCGGAGAATGGAGTTGCGGGAGCAAGATGACTACGAGGTTGTGAGGAAGGTGGGAAGAGGGAAATACAGTGAGGTCTTTGAGGGCGTTCACTCCACCGATAATGAAAAATGCATCATCAAGATCCTCAAACTCGTCAAGAAGAAAAAGTTAAAGAGGGAGATCAAAATATTGCATAATCTTTGTGGAGGTCCCAATGTTATAAAGCTACTTGACATTGTTAGGGACCAGCAATCAAAGACCCCAAGCCTTATATTTGAATATGTCAATAACACTGATTTTAAAGTTCTCTACCCCACCCTGTCAGATTATGATATTCGATATTATATCTATGAACTTCTAAAGTCTTTGAAGATAATACAATCAAGGCAAGGAGATATTGGGAACTACTACGGTGTTCAGCTTCTTGATGCTTCAGTGACAAAATACCAAGATTATGGTCACTAA 534 0.4007 MATTTTELGFLRKGSLKQFIMMTMMKRPMLRRMELREQDDYEVVRKVGRGKYSEVFEGVHSTDNEKCIIKILKLVKKKKLKREIKILHNLCGGPNVIKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKSLKIIQSRQGDIGNYYGVQLLDASVTKYQDYGH* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1592 177 ProSiteProfiles Protein kinase domain profile. 41 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1592 177 PANTHER CASEIN KINASE II SUBUNIT ALPHA 37 152 IPR045216 GO:0004674|GO:0006468
Amo04g1592 177 SUPERFAMILY Protein kinase-like (PK-like) 22 152 IPR011009 -
Amo04g1592 177 SMART serkin_6 41 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1592 177 PANTHER BNAA04G13490D PROTEIN 37 152 - -
Amo04g1592 177 Pfam Protein kinase domain 41 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1592 177 ProSitePatterns Protein kinases ATP-binding region signature. 47 77 IPR017441 GO:0005524
Amo04g1592 177 Gene3D Phosphorylase Kinase; domain 1 30 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1592 Amo-Chr4 75717321 75719435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1592 41 151 MAP Kinase Gene Family AT1G10210 29.752 2.07e-06 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Amo04g1592 Pkinase 1.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1592 K03097 - zju:107409035 189.119