Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1552 ATGTCAGGTATATTTACAGACACTGAGATGAATGAGCAATACCAGGAGGACGATGACTTTAACCAACAAGAAGAGCTAGTAAGTGACCAAGATACGATGGATGAACAGAATGAATTCGATCAAGATTTCAGAGATGAATTTACCGAGGGAGTGTTTTTTTCTGAATCTGATATGTCAGATTATATCCTTGAAGCCGCTTATGCGGTTGACTCCATGCAAGACATTACATCTTTGAAATTTAGTGAGAATGTTGCGGAGGAAATTGGCAAATACCACTTTTCTACTTTGCATCTTGCATTTGAATTTTATATCAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTAGTGGCAAGATTTACAGACAAATGTTTGTATGCCATAGGCAAGGATTCAGGATGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCCCGAATGGATGTTAAATCAGCACTCAATGATCCAAGTGGGTTCACCAGGGATGCTGTTGTTATTAGTCGTCAAAGTGCTTTGGTGGAATTTTCTAAACAACTGGCTGCTGTTGCTGTTAAAGTACCAGAGAGATATGAAGAGACACGTGATTTAATTATGGGATTGTACTCATCTTACAAGGCTACAGACGAAGGAGATAATCAACCTCACTCAGGTGTAGCTAGAAGTAGCAATCCGTATGTGCATCCAACCACTGGAGGCTCAGGACAACCATCTAAGAAGAAGAAGCTGCAACGTTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAACATGTCCTTGGCAAAAGGACATTGACAACAACGTTATAGAAAATGAAGCTATCGGTTCGGACGATGGCGACATGTGTACCGAAGCGACGGCTGAGTTAGATAGTGATAGTTAG 939 0.4068 MSGIFTDTEMNEQYQEDDDFNQQEELVSDQDTMDEQNEFDQDFRDEFTEGVFFSESDMSDYILEAAYAVDSMQDITSLKFSENVAEEIGKYHFSTLHLAFEFYIKYSKSKGFSARKSKTFKNSSGKIYRQMFVCHRQGFRMEKYYTMEKRKKEPRLETRTGCEARMDVKSALNDPSGFTRDAVVISRQSALVEFSKQLAAVAVKVPERYEETRDLIMGLYSSYKATDEGDNQPHSGVARSSNPYVHPTTGGSGQPSKKKKLQRCSVCQMEGHKKTTCPWQKDIDNNVIENEAIGSDDGDMCTEATAELDSDS* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1552 312 MobiDBLite consensus disorder prediction 226 260 - -
Amo04g1552 312 MobiDBLite consensus disorder prediction 1 35 - -
Amo04g1552 312 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 15 170 - -
Amo04g1552 312 MobiDBLite consensus disorder prediction 292 312 - -
Amo04g1552 312 MobiDBLite consensus disorder prediction 11 35 - -
Amo04g1552 312 Pfam FAR1 DNA-binding domain 101 171 IPR004330 -
Amo04g1552 312 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1552 Amo-Chr4 73763598 73765955 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo04g1552 FAR1 1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1552 - - ahf:112720852 314.694