Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1515 ATGGTATATAAATCTTCACCTGGTGAGATGAAACTTGAGGAAGATCTCGGCCCGGATCGGGAGGACGACTTCCAAACTGACGACGAAGAAAACCAGGGGAACAGGGTGTTTGATAATTTGGATGATGATTCTGAATCGGATTCATCAGTTCTTTCGCAAAAATTGTCCAATGATAATATCATGCCTTCTTGGCCTCAAAGCTATCGGCAATCCATGGACATGTTAACGAGTGTAACACCACCTGGAATTAGTTTCCTAAGGCGAATTGGATCAAAAGGAAGTAGTAATAATCAGTATTTGACTACAGCATTCAAGAGATCTCAAGAATGGAAGCAAGAGGATTCTTCTTTGGCTAAACCTCTTGTCTCGGATCAACTAAAAGAAGTGGAGAATGGTGTTTCAGAAGAACAACCTGCGAGACAGCAGTCAAGTGTATTTCAACATTCCAAGTTTTCTCTTGATGATTTGCCACCACCACAACACCAATGTTCATTTGCACAATCAGTTATTAATGGAACGAATATATTATGTGGGATAGGACTTCTTACGATTCCATATGCAATAAAAGAAGGAGGATGGTTGAGCCTTACAATCCTTGTATTATTTTCTATCATTTGTTGTTATACTGGAATTTTACTGAAAAGATGTTTGGAAAGCAACCCTGGACTCAAAACATATCCAGATATCGGCCAAGCAGCCTTTGGAGTAGTCGGTCGCTTAGGAATTGCGATATTCTTATACATGGAATTGTACGCAGCTGCTGTTGAGTTTATAACACTAATGAGTGATAACCTCTCATCACTGTTTCCTAATGTCCACATCAAAGTTGGTGGGATAGATTTGGAGACTCATGTGTTTTTTGCAATCACTGCAGCTCTTATGGTTCTTCCTACTGTTTGGCTTCGAAATCTAAGCCTTCTTTCTTATATCTCAGCTGGAGGAATATTTGCAACAATAATGGTGACATTATGCTTGTTTTGGGTTGGGTTGGTTGAACATGTTGGATTGAAACCAGGAAGAAAACTTTTAGACCTTGAAAACATTTCTGTATCAGTTGGTCTATATGGTTTTGGTTTTGCTGGCCATGCTGTTTTCCCAAATGTCTACTCTTCTATGCAGGATCCATCAAGATTCCCATCAGTTTTATATCTTAGTTTTGCCTTTTGTCTTTTTATGTACATGAGTGTTGGTGCAGTTGGATATTTAACTTTTGGCGAGTCAGTTGAGTCTCAATTTACCTTAAACATGCCCAAAGAGTTATATGCATCAAAGATTGCAACCTGGACAACTGTTATAACACCATTGGCAAAATATGCACTAACGATATTACCCATTGCATTGAGTATAGAGGAACTTATCCCTAACAACAAGCTAAGATGTCATGCCACAGCTATTGCTATTAGAACATTTTTAGTGATTTCAAGTTTGGTTGTGGCCCTCTCTGTTCCTTATTTCGGTGCTTTGATGGCGCTAATTGGTGCTTTTATGTCAATGACAGTTGCACTTATTTATCCTTGTGCGTGTTATCTAAAGATACACAACGGTAGATTATCAAAACTTGAGATAACAAAGTGTGTATTAGTTATTATTGTGGGGGTGCTAAGCTCTATCGTTGGAACATATTCTGCTCTATTAAGAATAGCTAATGGAGACGACTAA 1659 0.3858 MVYKSSPGEMKLEEDLGPDREDDFQTDDEENQGNRVFDNLDDDSESDSSVLSQKLSNDNIMPSWPQSYRQSMDMLTSVTPPGISFLRRIGSKGSSNNQYLTTAFKRSQEWKQEDSSLAKPLVSDQLKEVENGVSEEQPARQQSSVFQHSKFSLDDLPPPQHQCSFAQSVINGTNILCGIGLLTIPYAIKEGGWLSLTILVLFSIICCYTGILLKRCLESNPGLKTYPDIGQAAFGVVGRLGIAIFLYMELYAAAVEFITLMSDNLSSLFPNVHIKVGGIDLETHVFFAITAALMVLPTVWLRNLSLLSYISAGGIFATIMVTLCLFWVGLVEHVGLKPGRKLLDLENISVSVGLYGFGFAGHAVFPNVYSSMQDPSRFPSVLYLSFAFCLFMYMSVGAVGYLTFGESVESQFTLNMPKELYASKIATWTTVITPLAKYALTILPIALSIEELIPNNKLRCHATAIAIRTFLVISSLVVALSVPYFGALMALIGAFMSMTVALIYPCACYLKIHNGRLSKLEITKCVLVIIVGVLSSIVGTYSALLRIANGDD* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1515 552 MobiDBLite consensus disorder prediction 1 64 - -
Amo04g1515 552 PANTHER AMINO ACID TRANSPORTER AVT1D 46 547 - -
Amo04g1515 552 MobiDBLite consensus disorder prediction 49 64 - -
Amo04g1515 552 Pfam Transmembrane amino acid transporter protein 162 543 IPR013057 -
Amo04g1515 552 PANTHER OS05G0424000 PROTEIN-RELATED 46 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1515 Amo-Chr4 72686652 72698057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1515 10 549 Amino Acid or Auxin Permease AAAP Family AT5G02180 51.439 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1515 K15015 - pop:7468814 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2590 14 109905038 109916436 Amo04g1515 04 72686652 72698057 hybridization