Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1479 ATGGCCAGAAACATGAACCAACAACTCTTCTCTGTGTTGCTGTTCCTTCTTATCCCAGTTTCATCATCTCAGCCGGATCAGCTTCTCTATTCCGGATTCAAGAACTGTGATGCAACCAACATATCCTTAAACGGCATAGCAGAAATCGAGAAAAACGGTTTGCTAAGATTAACAAACGAAACAAGCAGATTAATGGGTCACGCTTTCTACCCGTCACCATTTCAGGTCAAAGACAAAACCAGTGGTAAAGTTCTTTCTTTTTCAACTTCCTTCGCTCTTGCTATTGTTCCTGAGTATCCCAAGCTCGGTGGCCATGGCTTAGCCTTCACCATAGCCACTTCGAAAGATTTCAAAGCTCACCCAAGCCAGTACTTGGGTCTCTTCAACCCAGACGATGTTGGTAACTTAACTAACCATCGTTTTGCTGTTGAGTTTGACACTGTTCAAGACTTTGAGTTCGGTGATATAAATGATAACCATGTTGGGATTGATATCAATAGCTTGCAATCCAATGCTTCTGTTAATGCAAGTTACTATCTTGATGATAATGGGTCAGGGAAATTGCAGGATTTGAATCTTAAGAGTGGGAAACCCATCATGGTTTGGGTTGATTATGATTCTGTGAAGAATGTTCTGAGTGTTGCAATGTCTCCAACTTCTTCTAAGCCTAAAAGGGTAACTTTGTCATTTGATGTGGATCTCTCACCCATTTTTCTTGATACTATGTATGTTGGATTCTCTTCTTCAACAGGGTTGCTTGCTAGTTCTCATTATATATTGGGTTGGAGCTTTAAAATCAATGGTACAGCACCAGTTCTTGATCTTGCTAATCTACCGCAACTTCCAGGTCCAAAGAAGAAGCATAACTCTCTGATAATTGGGATTTCTACTTCGATTTCGGTTTTGGTTTTGTTTGGAGTTGCAATTGGGGTTTACCTCTTCTGGAAGATGAAGAATGCAGATGTAATCGAAGCGTGGGAGCTCGAGATTGGGCCGCATAGAGGATTCAGGGACAAGGAGCTGCTTGGACAGGGTGGATTTGGAAGGGTTTACAAAGGGATATTGCCGAATTCGAAGATACAAGTGGCTGTAAAGAGGATCTCACATGAATCAAAGCAGGGGTTGAGGGAATTTGTATCGGAAATTGCGAGTATAGGCCGACTCAGGCACCGGAACTTGGTTCAATTATTGGGATGGTGCCGGCGCCGCGGAGATCTTTTGCTTGTTTATGATTTTATGGCTAATGGGAGTTTGGATAAGTACTTGTTTGATGAGCCAAAGATTGTCCTGAATTGGGAACAAAGGTTCAAGATCATAAAGGGTGTTGCTTCAGCCCTTTTGTATCTTCATGAGGGCTATGAGCAAGTAGTTATACATAGAGATGTGAAGGCTAGTAATGTGATGCTTGATTCGGAAATGAATGGGAGACTAGGCGATTTCGGGTTAGCGAGATTGTATGAACATGGTGCTAATCCAAGCACAACAAGAGTTGTTGGTACATTGGGGTATTTGGCACCAGAATTGCCTAGAACAGGAAGGGCAACCACAAGCTCCGATGTGTTCGCGTTCGGCGCGCTTCTGCTAGAGGTAGCATGCGGGCGCAGGCCTATCGAGCCGAAGGCGTTGCCAGAGGAGTTGGTTCTTGTGGATTGCTTGTGGGAGAAGTTCAAAGAAGGGAGAATACTTGACATGGTGGATCCAAGGTTGAATGGGGATTTTGATGAAAATGAGATTCTTATGGTGCTGAAATTAGGGTTGATATGTTCAAATGATAATCCAAATGCTAGGCCTAACATAAGGCAAGTTATGAGGTATTTGGATGGAGAGGTTGAGTTGCCAGATGAGATGAGAAAGCATATAAGTTCAAATCATGAAGGGTTTGATGAGTTCTTGCATTCACTTGCTTCTTCGTCATTTGATACTGGCTCCTATATTGGAAATAGAGACATGGATAATAGTTTTACTTCTTTTGGTTATTCTCCTCAGTCACTTCCTCAAGCTAGAGGAGAAACAAGGTGA 2019 0.4264 MARNMNQQLFSVLLFLLIPVSSSQPDQLLYSGFKNCDATNISLNGIAEIEKNGLLRLTNETSRLMGHAFYPSPFQVKDKTSGKVLSFSTSFALAIVPEYPKLGGHGLAFTIATSKDFKAHPSQYLGLFNPDDVGNLTNHRFAVEFDTVQDFEFGDINDNHVGIDINSLQSNASVNASYYLDDNGSGKLQDLNLKSGKPIMVWVDYDSVKNVLSVAMSPTSSKPKRVTLSFDVDLSPIFLDTMYVGFSSSTGLLASSHYILGWSFKINGTAPVLDLANLPQLPGPKKKHNSLIIGISTSISVLVLFGVAIGVYLFWKMKNADVIEAWELEIGPHRGFRDKELLGQGGFGRVYKGILPNSKIQVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFDEPKIVLNWEQRFKIIKGVASALLYLHEGYEQVVIHRDVKASNVMLDSEMNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGRATTSSDVFAFGALLLEVACGRRPIEPKALPEELVLVDCLWEKFKEGRILDMVDPRLNGDFDENEILMVLKLGLICSNDNPNARPNIRQVMRYLDGEVELPDEMRKHISSNHEGFDEFLHSLASSSFDTGSYIGNRDMDNSFTSFGYSPQSLPQARGETR* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1479 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Amo04g1479 672 CDD STKc_IRAK 342 608 - -
Amo04g1479 672 SUPERFAMILY Protein kinase-like (PK-like) 333 616 IPR011009 -
Amo04g1479 672 PANTHER - 9 656 - -
Amo04g1479 672 Gene3D Phosphorylase Kinase; domain 1 332 412 - -
Amo04g1479 672 Pfam Protein kinase domain 337 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1479 672 CDD lectin_legume_LecRK_Arcelin_ConA 30 268 IPR001220 GO:0030246
Amo04g1479 672 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Amo04g1479 672 SMART serkin_6 336 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1479 672 ProSiteProfiles Protein kinase domain profile. 336 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1479 672 Pfam Legume lectin domain 28 278 IPR001220 GO:0030246
Amo04g1479 672 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 9 656 - -
Amo04g1479 672 Gene3D Transferase(Phosphotransferase) domain 1 413 626 - -
Amo04g1479 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 286 IPR013320 -
Amo04g1479 672 Gene3D - 28 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1479 Amo-Chr4 69940160 69942211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1479 30 614 Receptor kinase-like Gene Family AT3G55550 60.762 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo04g1479 Pkinase 5.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1479 - - gmx:100784346 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2555 14 107368519 107371578 Amo04g1479 04 69940160 69942211 hybridization