Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1471 ATGCTTGCTGATCCAAAGGAGGCAAGAGCTGGAATTAGGGAGGTCCATTTTTTCCCTTTCAATTCTGGAGACAAGAGGACTCACAGATCCAGCAAAGGTGCTCCTGAGCAGATATTGAACATCTGCAACTGCAAAGAGGATGTGAGGAGAAAGGCTATGCAACTATTGTTAAGTTTGCTGAGCGTGGGCTCCGATCTTTGGGGGTTGTTAGATAGGTTTGACAAAAAAAAGATATTAACATTTATAAAGTACCTGAGAAATCAAAAGATGCTCCTGGTGCACCATGGCAATTTGAGCATAAAACACTGA 309 0.4239 MLADPKEARAGIREVHFFPFNSGDKRTHRSSKGAPEQILNICNCKEDVRRKAMQLLLSLLSVGSDLWGLLDRFDKKKILTFIKYLRNQKMLLVHHGNLSIKH* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1471 102 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 4 59 IPR023299 GO:0000166
Amo04g1471 102 Gene3D - 1 63 IPR023299 GO:0000166
Amo04g1471 102 PANTHER CALCIUM-TRANSPORTING ATPASE 1 54 - -
Amo04g1471 102 PANTHER PLASMA MEMBRANE ATPASE 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1471 Amo-Chr4 69619154 69621390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1471 1 51 Primary Pumps ATPases AT2G24520 74.194 1.24e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1471 K01535 - aip:107636080 124.405