Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1454 ATGAATGAGGTGGTGCCTTCTAGAAGATACTTGGGTGATGAAAGGAACATGGATGATCTAGAGTTGCCAATGTTTGATTTTGATACCTTGATGTGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATAGGATTGATTGAAGGCCAAGAAATTGCTGTGAAAAGATTGTCAGAAGACTCTGAACAAGGAATTGAAGAATTTAAAAATGAAGTCAAATCAATTGTCAAGCTGCAACACCGAAATCTTGTTCGGTTGCTTGGTTGCTGCATTAAGAAAAATGAGAAGATGTTGGTGTATGAATATATGGAAAATAGAGACCTTGATTCCATTTTATTTGGTAACTTGCATTATTTATTTAGATTTTTTTATTTTGGTAGTAATTGTAAAATTGGCCTCAATTCCTAA 432 0.3426 MNEVVPSRRYLGDERNMDDLELPMFDFDTLMWLQTISLKIINLEKEASVVFIGLIEGQEIAVKRLSEDSEQGIEEFKNEVKSIVKLQHRNLVRLLGCCIKKNEKMLVYEYMENRDLDSILFGNLHYLFRFFYFGSNCKIGLNS* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1454 143 Pfam Receptor serine/threonine kinase 1 27 IPR022126 GO:0004674
Amo04g1454 143 SUPERFAMILY Protein kinase-like (PK-like) 48 126 IPR011009 -
Amo04g1454 143 ProSiteProfiles Protein kinase domain profile. 1 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1454 143 Gene3D Phosphorylase Kinase; domain 1 21 110 - -
Amo04g1454 143 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 124 - -
Amo04g1454 143 Pfam Protein tyrosine and serine/threonine kinase 57 120 IPR001245 GO:0004672|GO:0006468
Amo04g1454 143 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-1 15 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1454 Amo-Chr4 68845490 68846045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1454 8 138 Receptor kinase-like Gene Family AT4G23210 42.466 1.45e-24 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo04g1454 PK_Tyr_Ser-Thr 1.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1454 - - ahf:112796914 288.885