Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1449 ATGGAAGCCACTTCTATGACTCATCAGTTGTTGAAGGGCTTTTGTGATGGTACACAGTGGAAGTATGCTGTTTTTTGGAAGCTTAACCACCGTTTCCCCATGACTTTGACCTGGGAAGATGGATATTATGGTTACCAGAAAACTAATGAGGCCGCGGAGAGTATGTTGGATGACATCAATTTCAAATTCCCAGCTGAGGTATATTCTTCAAGTGGTGAAATTATTGAAGATCCAGGAGATTATTCTGCTGGACTACTCGTGGCTGAAATGTCTCATCATAAATACAGTTTGGGAGAGGGGGTTGTTGGTAAGGTAGCTTTTACTGGGAATCATTGTTGGGTGAGTGAGGACATTCTTACCCATGGGTTGGATGCTAATTTAATGCCTGAGTGTCCTGATGAATGGCTTCTTCAATTTGCCTCTGGCATCAAGACCATTGTGTTGATTCCAGTTCTTCCTCAAGGAGTTTTGCAATTTGGTTCATTTCAAGCGGTTGCTGAAGACCTGGAATTTGTTACCAATATCAAGGAGAAATTCCATTCCATTCATCTTCTGGCAGCAAATACTACAGCATTGAACTATGGAGTTGATTGTCAAGATTGGTCATTCTCAGACCCAACAAATACTTTTATGGATATCTTGGATGAATCATCCAATATCACAAACAGTACAATAAAAACTGATGTTCTGGCTAGAATTGTGCCTAGTGTGAATGCATCAACAATGTTGAACCCAGCAATGTTGTCTCAGGTGGAGACAAAAGATAATCTGGAAGAAGAGATATGGCCCACTTCTCCGTGGGTCAATGATGTGGGAGTATTCCAAGAGATATCAAATGGATTAGGTTTATACTCCGGTAAGACAGAGCAACAATTTGGAAGCAATGAAACTGGTTATGAGGATATCAAGGATCTGAATGGCTTCTTGGCTTTTCCCCCTGAGTCTGAATTGCACAAAGTGCTTGGATCAGCAGCTCCACACGGGAAAACAAGGAATTCCATGTCTAAACATACCTCTGTTGTGGATACTTACAGTAACTCAACCTTTATATCCAACAACAAAGAACATGGTGATATTGAGAGTTTGGAGCACCCTGAAGATGTTGATCCGAAATATCTTTTGGATGCTGTTTATGGGGATTTATTTAGTGCCTGCAACGATACTTCAAGCATATCCAACAGTTTTAGGTCCCCTATAAGCAAGAAGATGCCATTTACCGGTTTGATTCATCCCAGGAACAGTTGCGAAGAAAGCAGTTTGGTTATGAAAGATGTGAAAAGTGATCTTAAGGCGGCAGTTAGAGTCAAGGGCAGAGATGCTATTACATCGCCATCTTTTGATGGAAATTCAAGCTTATTGACTGACGAGCCTCAAGAAGAAAAGGTTTATAGTCATTTGCAATCTACTAATGGACCAAAGATCTCTAGTACCTACAAGAAAAGAGCAAGGCCAGGTACCCAAAAGTCAAGGCCGAGAGATAGACAATTGATCATGGACAGGATGAAGGAGTTGAGGGAGCTTGTCCCAGATGGTGGAAAGTGTAGCATCGACAACCTCTTGGAGAGAACCATAAAGCATATGCTATACTTGAGAAAAATAACAAGCCAAGCTGAGAAGCTTAAGAGATTCGCACATAAAGAGGTTCCCAAATGCAGCAAGCAGAAGATCAATTATAACCAATCAGGGAGGAGCTGTGCATATGACTTGGAAAGTGAACAAGCATGGCCCATAGTGATAGAAGATCTGGAATGCTCAGGCCACATGCTTATTGAGATGGTATGCAATGAGCATGGATTCTTCTTGGAGATTGCTCAGGTGATCCGGAAGCTGGAACTGACCATCTTGAAAGGTGTCTTAGAAAACCGCTCATCCGCAGCCTGGGCTTGTTTCATTGTTGAGGCTCCAAGAGGGTTTCACAGGATGGATGTTTTATGTCCTTTATTGCATCTTCTACAGCGGAGGAAGAACCCTGTTCCATATAAAAGCTGA 1989 0.4198 MEATSMTHQLLKGFCDGTQWKYAVFWKLNHRFPMTLTWEDGYYGYQKTNEAAESMLDDINFKFPAEVYSSSGEIIEDPGDYSAGLLVAEMSHHKYSLGEGVVGKVAFTGNHCWVSEDILTHGLDANLMPECPDEWLLQFASGIKTIVLIPVLPQGVLQFGSFQAVAEDLEFVTNIKEKFHSIHLLAANTTALNYGVDCQDWSFSDPTNTFMDILDESSNITNSTIKTDVLARIVPSVNASTMLNPAMLSQVETKDNLEEEIWPTSPWVNDVGVFQEISNGLGLYSGKTEQQFGSNETGYEDIKDLNGFLAFPPESELHKVLGSAAPHGKTRNSMSKHTSVVDTYSNSTFISNNKEHGDIESLEHPEDVDPKYLLDAVYGDLFSACNDTSSISNSFRSPISKKMPFTGLIHPRNSCEESSLVMKDVKSDLKAAVRVKGRDAITSPSFDGNSSLLTDEPQEEKVYSHLQSTNGPKISSTYKKRARPGTQKSRPRDRQLIMDRMKELRELVPDGGKCSIDNLLERTIKHMLYLRKITSQAEKLKRFAHKEVPKCSKQKINYNQSGRSCAYDLESEQAWPIVIEDLECSGHMLIEMVCNEHGFFLEIAQVIRKLELTILKGVLENRSSAAWACFIVEAPRGFHRMDVLCPLLHLLQRRKNPVPYKS* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1449 662 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 481 530 IPR011598 GO:0046983
Amo04g1449 662 MobiDBLite consensus disorder prediction 464 492 - -
Amo04g1449 662 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 6 658 IPR043561 GO:0003700|GO:0006355
Amo04g1449 662 MobiDBLite consensus disorder prediction 464 482 - -
Amo04g1449 662 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 179 IPR025610 -
Amo04g1449 662 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 6 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1449 Amo-Chr4 68624530 68630873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1449 479 656 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 44.724 6.53e-44 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1449 - - adu:107484428 1334.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2538 14 106276093 106282431 Amo04g1449 04 68624530 68630873 hybridization