Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1442 ATGCAGAACATTATGTATGGTACTAGATTTTTGATAAATCCAGATATTTTTGAGACTTTGATGCTTCGAAAAAGCGTGTACTATAGAGAGATCTCGAAGTACCTGTCTGTGATTTCTGGCAAACCGGCATATCTTGATGAAGATGAAGTTTTATATTCTACTGGGAGGAAGACAATAAAGGAGTTATGTGCAGTTGCGGATGTTGGATTCTATGTTGTTCTAGCCACTGTTCTTGATGTTAAACCCATTTCAAGGTGGTGGTATAAATCATGTATTTGCAGCGTGAAGGCAGAAGCTAATGCGGATAAATACTTCTGCGATGGCTGTAATAGGGACGTGAAGAATGTGGTTAACAGGTATAAGTTGAATTTGTTGGTTTTTGATGGTACTGCTACAACGAATTTTGTTGTGTTTGATAAAGAGGTCACAGCTCTATTCGGACAAACCTGTACTGAGATAGTGAAAGAGTTGAATAAAAAAGGGAAAGCAAGCAAACATTCTACTGATTTTAATGAGTTTTTCCTTGATAAGGAGTTTCTATTCAAGGTCGAAGTAGAAACTATTGGATGGTGCGATTCTTATGATGTATCGATGCTACATTTTGATTCTAATAGTTTACCGAGGCAGAGGGACACTCAAGGCCCAATAAAATCTGGTGTACCCCATGCTGGTCCTGTTTACCCTGTTCAGTCACCTGATCCAAATGTGGAAAATTCATCTGTTACTAAGAGACCTGTTGTCAGGCGCCTGTTGGATGAGTTTAACATGTCTGGAGCTTTTTCTGTTAAAAAGTAG 795 0.3862 MQNIMYGTRFLINPDIFETLMLRKSVYYREISKYLSVISGKPAYLDEDEVLYSTGRKTIKELCAVADVGFYVVLATVLDVKPISRWWYKSCICSVKAEANADKYFCDGCNRDVKNVVNRYKLNLLVFDGTATTNFVVFDKEVTALFGQTCTEIVKELNKKGKASKHSTDFNEFFLDKEFLFKVEVETIGWCDSYDVSMLHFDSNSLPRQRDTQGPIKSGVPHAGPVYPVQSPDPNVENSSVTKRPVVRRLLDEFNMSGAFSVKK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1442 264 SUPERFAMILY Nucleic acid-binding proteins 55 186 IPR012340 -
Amo04g1442 264 Pfam Replication factor-A C terminal domain 71 187 IPR013955 -
Amo04g1442 264 CDD RPA1_DBD_C 57 186 IPR013955 -
Amo04g1442 264 Gene3D - 49 203 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1442 Amo-Chr4 68357374 68359040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1442 35 172 Core DNA Replication Machinery Family AT5G61000 26.429 1.53e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1442 - - adu:110276556 425.246