Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1336 ATGAATGAATCAACTTCAAATCAGTTGAATGAGTGCGATTTGGATGATTCTTCTGAAACATTTCGGTTCACCGTGCAAACTAGCTGTGTTGTGGATGAAAAATTTGTCCCAAAGGTCGAAATGATTTTCAAGACACTAGAAGAAGCTGGGAAGTTCTACAAACATTATTCCAAACTTGCCAATTTTTCTACGAAAATAAGGAACACGACTCGGGATGGAGAAAAGATTAAGAATCAACTAATTGTATGCACTAGAGAGGGGAGGTGGAAATCCAAGATATCTCCAACTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTCCGGCTAGAATTTACGTACACATAATGAAGGATGTTGGTCTTTGGACAATTTCCAAAGTTGTTTTGAATCACTCACATCCTTGTTGCCTAAAGGGTTGA 420 0.3833 MNESTSNQLNECDLDDSSETFRFTVQTSCVVDEKFVPKVEMIFKTLEEAGKFYKHYSKLANFSTKIRNTTRDGEKIKNQLIVCTREGRWKSKISPTLKTNPSAGLNCPARIYVHIMKDVGLWTISKVVLNHSHPCCLKG* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1336 139 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 25 134 - -
Amo04g1336 139 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 25 134 - -
Amo04g1336 139 Pfam FAR1 DNA-binding domain 51 135 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1336 Amo-Chr4 64140637 64141405 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo04g1336 FAR1 5.8e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1336 - - aip:107614666 249.595