Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1327 ATGATAATGGATCCACATCTTCATGGATTTGGTGGTTCCACAAAGGAATTCCGGTTGGAGAATCAGTCTTTGCCAATTGTGCAGAATCAGAGGTTTGAAAATGGTTTATTTGATCAAAGTAGGGAATTCGGTTACCTTCAGTCCAATCTACTGCCACCAGCTAATAATACACATTCATCCTCAATTTTGACAAATGATGAGCCTTCTCCGGAGGATTGCGATTTTTCTGATGCAATTTTAGGATACATCAATCAAATCCTAATGGAAGAAGACATGGAAGACAAGACATGTATGCTTCAAGATTCTTTGGATCTTCAGGTTGCCGAGAAATCCTTATATGAGGTGATAGGTGAAAAGTATCCATCTCAGCCATTAGGGATTAATCCAAATGATGGGGAAGGAGTTAATGACTTGTTTGAAAACTATGGTAGTGATCTTGTTAATGACGGCGATCTTAGAAGCATTGTTATGAGTAGTTCGTTTCTTCGGAACTCAGAGGAAGTACATCGCCAAAACTTTCAAGGGAATAGCATTTCACAGTCATCTCATAGTTCTTCGAATAGCGTAATAAGCAGCTTGGAAGGTCCTGTTGAATCTCCAAATAGCATTCTTCAGGTGCCAGATATGAGCAGTGAGAGTCAATCTATTTTGCAATTTCAGAAGGGTGTCGAGGAGGCTAGTAAATTTCTTCCAAGTGGAAACGGTCTCTTTTCCAATTTTAGTGCAGCTAAGTTGTCGTCACCGTTAGAGCCTAAATTGGGGACCAATGCATTGTCTGTTAAGGTAGAGAAGGATGATGGCGAGTCTTTTCTAGCAGGATCCAAGGGAAGAAAGCATTCTGACAGGGAAGAGGGAGACGACGAAGAAAATAGAAGCAGCAAGCAAGCTGCAGTTTATTCGGAACCTACATTGCGGTCAGATATGATTGATATATTCCTGCTTCACAGCGCAGGGGATGGTAAGCAACATTATATGGCACGTCGTGATGCTTTACAGAATAAGAACACGGACAAGATGTTGCCGAGAAATGGTAAGTCAAAAGCATCGAAAACTGGGAAGGGGCGTGGTAAGAAACAAAATGGGAGAAAAGAAGTGGTTGATTTGAGAACCCTTCTGGTTCTTTGTGCACAAGCTGTTGCAGCCGATGACTCCAAAAGTGCCCATGAGTTTCTTAAGCAGATCAAGCAGCACTCGAGTCCTTTTGGAGATGGAAGTCAGAGGTTAGCTCATATGTTTGCAGATGGCCTCGAGGCACGCTTGGCAGGCACTGGAAGCCAAATCTATAAAGGCTTAATTTGTAAAAGAACATCAGCAGCTGATGTTCTTAAAGCATACCATCTATACCTTGCTGCATGCCCGTTTAGAAAGATTTCAAATTTTATGTCAAACATTACAATTAGGACATCTTCTGCAGACTCAATGAGAGTTCATGTTATAGATTTTGGTATCCTTTATGGTTTCCAGTGGCCGACTTTTATTCAGAGGCTTTCGTGGAGATCTGGGGGACCACCGAAACTTCGGATCACAGGAATTGACTTCCCACAACCTGGTTTCAGGCCTGCGGAGAGAATTGTAGAAACGGGACGTCGCTTGGCAGCTTATGCTGAAACTTTCAATGTCCCATTTGAGTACAACGCCATAGCAAAAAAGTGGGAAACAATTCAACTGGAAGAACTGAAGATCGATAGAGATGAATATGTTGTTGTTACTTGTTTTTATCGAGGCAAAAACTTATTGGATGAATCTGTGGTAGTGGAAAGTCCAAGGAATAAGTTCCTCAATTTGATAAGGAAGATCAACCCAGATATCTTCATTCATGGCATTATTAATGGGGCCTTTAATGCCCCTTTTTTTGTTACTCGATTCAGGGAAGCACTGTTTCACTACTCTTCACTGTTTGACATGCTTGAAACTATTGTGCCTCGTGAAGACTGGGAGAGGATGCTGATTGAGAAGGAGATATTCGGGCGAGAAGCATTGAATGTTATAGCCTGTGAAGGCTGCGAGAGAGTTGAGCGGCCAGAGACATATAAGCAGTGGCAAGTCCGAATATTAAGGGCCGGGTTTACGCAACAACCTTTTGATCCTAAGTTAATAGGGATGGCAATGGATAAAGTAAGGTCTGGCTTTCACAAGGATTTCCTAATTGATGAAGATGGTCAGTGGCTGGTGCAAGGTTGGAAGGGGCGAATCATTTACGCACTCTCTTGTTGGAAACCTGCATGA 2226 0.4232 MIMDPHLHGFGGSTKEFRLENQSLPIVQNQRFENGLFDQSREFGYLQSNLLPPANNTHSSSILTNDEPSPEDCDFSDAILGYINQILMEEDMEDKTCMLQDSLDLQVAEKSLYEVIGEKYPSQPLGINPNDGEGVNDLFENYGSDLVNDGDLRSIVMSSSFLRNSEEVHRQNFQGNSISQSSHSSSNSVISSLEGPVESPNSILQVPDMSSESQSILQFQKGVEEASKFLPSGNGLFSNFSAAKLSSPLEPKLGTNALSVKVEKDDGESFLAGSKGRKHSDREEGDDEENRSSKQAAVYSEPTLRSDMIDIFLLHSAGDGKQHYMARRDALQNKNTDKMLPRNGKSKASKTGKGRGKKQNGRKEVVDLRTLLVLCAQAVAADDSKSAHEFLKQIKQHSSPFGDGSQRLAHMFADGLEARLAGTGSQIYKGLICKRTSAADVLKAYHLYLAACPFRKISNFMSNITIRTSSADSMRVHVIDFGILYGFQWPTFIQRLSWRSGGPPKLRITGIDFPQPGFRPAERIVETGRRLAAYAETFNVPFEYNAIAKKWETIQLEELKIDRDEYVVVTCFYRGKNLLDESVVVESPRNKFLNLIRKINPDIFIHGIINGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERVERPETYKQWQVRILRAGFTQQPFDPKLIGMAMDKVRSGFHKDFLIDEDGQWLVQGWKGRIIYALSCWKPA* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1327 741 MobiDBLite consensus disorder prediction 332 361 - -
Amo04g1327 741 MobiDBLite consensus disorder prediction 175 204 - -
Amo04g1327 741 PANTHER SCARECROW-LIKE PROTEIN 9 46 740 - -
Amo04g1327 741 ProSiteProfiles GRAS family profile. 359 739 IPR005202 -
Amo04g1327 741 MobiDBLite consensus disorder prediction 268 300 - -
Amo04g1327 741 MobiDBLite consensus disorder prediction 268 294 - -
Amo04g1327 741 Pfam GRAS domain family 368 739 IPR005202 -
Amo04g1327 741 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 46 740 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1327 Amo-Chr4 63493011 63495236 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1327 45 740 GRAS Transcription Factor Family AT2G37650 52.609 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo04g1327 GRAS 3.1e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1327 - - ccaj:109816616 1130.93