Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1326 GTTTTAAGCAAATTTGTTGGTGAAACTGAAAAGAATGTGAGGGACCTTTTTGCTGATGCTGAACAAGAGCAGAGGAGCCGAGGGGATGAAAGTGATTTGTATGTAATTTTCTTTGATGAAATCGATGCTATTTGTAAGATTCTTCAAATTTTCTATGTTACTAATATTATTCACACAATCTTCCTCAGTGTGAGTGCAGTCAAGAGGTTCACTCGTGATGGTACTGGAGTTCATGATAGCATTGTGAACCAGCTTCTTACTAAGATAGATGGTGAGGAGTCACTAAATAATGTTTTGCTTATTGGACTGACCAACAGAAAGGATATGCTTGATGAGGCTCTCTTAAGACCAGGGCGATTGGAAGTCCAGGTTGAGATAATCTTTCTTGATGAAAATGATCGATTGCAAATTCTTCAAATTCATACTAACAAGATGAAAGAAAATTCTTTTCTTGCTCCTGATGTGAATCTTCAAGAGCTTGGTATGTGTTTATTGTGGCAAATTTAA 507 0.3669 VLSKFVGETEKNVRDLFADAEQEQRSRGDESDLYVIFFDEIDAICKILQIFYVTNIIHTIFLSVSAVKRFTRDGTGVHDSIVNQLLTKIDGEESLNNVLLIGLTNRKDMLDEALLRPGRLEVQVEIIFLDENDRLQILQIHTNKMKENSFLAPDVNLQELGMCLLWQI* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1326 168 Gene3D - 1 128 IPR027417 -
Amo04g1326 168 Pfam ATPase family associated with various cellular activities (AAA) 2 126 IPR003959 GO:0005524|GO:0016887
Amo04g1326 168 PANTHER VESICULAR-FUSION PROTEIN NSF 1 46 IPR039812 GO:0016887|GO:0035494
Amo04g1326 168 PANTHER VESICULAR-FUSION PROTEIN NSF 71 161 IPR039812 GO:0016887|GO:0035494
Amo04g1326 168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 159 IPR027417 -
Amo04g1326 168 Gene3D - 130 163 - -
Amo04g1326 168 CDD AAA 2 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1326 Amo-Chr4 63419307 63420542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1326 1 162 Calmodulin-binding Proteins AT3G56690 25.309 1.50e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1326 K06027 - gmx:100779259 230.72