Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1311 ATGTTAAGCTACCAGGAAATAGGCATATTGTCAACTGTTGGAATTAATGACATTGATGATCGTCCAACATTAGTTTGCACAGACTTGGCCACTAGGGGTCTGGACTTGGATGTAGATCATGTTGTTATGTTTGACTTCCCCTTGAACTCTGTGAGTATCATAGCCATGATCGATTACCTTCATCGGACTGGTAGAACTGCTCGTATGGGTGCAAAAGGGAAAGTAACCAGTTTGGTTACAAAGAAGGACTTGATCTTGGCGACTAGAATAGAGGAGGCAATGAGGAAGAATGAGAGTTTGGAGGCTATCATGAAAGAAGGAGTACGAAGGGATATCGCCAGGACCCAAGTTAATGGGCAGAGTGGGAAGGACAGAAAATTAGTTAAAGTTTCTAAAGTTAAGAACAATCCTGGTGGACGTGCCAGTTTAGGGAATAAATGA 441 0.424 MLSYQEIGILSTVGINDIDDRPTLVCTDLATRGLDLDVDHVVMFDFPLNSVSIIAMIDYLHRTGRTARMGAKGKVTSLVTKKDLILATRIEEAMRKNESLEAIMKEGVRRDIARTQVNGQSGKDRKLVKVSKVKNNPGGRASLGNK* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1311 146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 105 IPR027417 -
Amo04g1311 146 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 19 131 - -
Amo04g1311 146 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 19 131 - -
Amo04g1311 146 Coils Coil 90 110 - -
Amo04g1311 146 Gene3D - 17 137 IPR027417 -
Amo04g1311 146 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 112 IPR001650 -
Amo04g1311 146 Pfam Helicase conserved C-terminal domain 21 70 IPR001650 -
Amo04g1311 146 MobiDBLite consensus disorder prediction 115 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1311 Amo-Chr4 62377974 62378851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1311 24 83 Eukaryotic Initiation Factors Gene Family AT3G13920 40.984 1.18e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1311 - - ahf:112766979 212.231