Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1307 ATGGATGATTCAACCTCAGATTATCAGCTCAATCAGGGCGAAGTGGATTTTGAATTTGCTTCGAACGAAGTTTCTGAGGCCCTCTCTGTTGTTGATGACCAGTTTGTTCCCAAGGTTGGAATGACTTTTAAAACTCTTGAAGATGCTGCAAAATTTTACAAGGACTATGCCAAGGCTACAGGTTTTTCTACAAGAGTTCGGAGCACAAATAAAAAGGGAAACAAAATTAAGAATCAATTGATCACATGCAACAGAGAAGGAAAATGGAAATCTAAAATATCTTCGACCGAGAAGACAAATCCCACAGCTGGTTTAAATTGTGCTGCAAGAATTTATATACACACATTGAAGGATGTTGGTGCTTGGATCATTTCGAAGGTCGTGTTGCATCATTCACACCCTTACTGTCCAACTCAAGCAGAGATGCTCAAACAGTATAGGGAACTAAGCATGTCCGTTCGTCGTACAATAGAGAATAACGAGGAGGCCGATCTTTATGAAGACCGTCATATATGGGTTCCAATCTATCTGGATCACCACTTCTAG 546 0.4029 MDDSTSDYQLNQGEVDFEFASNEVSEALSVVDDQFVPKVGMTFKTLEDAAKFYKDYAKATGFSTRVRSTNKKGNKIKNQLITCNREGKWKSKISSTEKTNPTAGLNCAARIYIHTLKDVGAWIISKVVLHHSHPYCPTQAEMLKQYRELSMSVRRTIENNEEADLYEDRHIWVPIYLDHHF* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1307 181 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 156 - -
Amo04g1307 181 Pfam FAR1 DNA-binding domain 51 135 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1307 Amo-Chr4 62352176 62354041 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo04g1307 FAR1 4.9e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1307 - - adu:110278638 270.396