Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1301 ATGGACAGCAAGGCGGTGGCGCAAAATATCATATCTAAGATCGCGGAGGAAGTGCGCGCCCACTCTCAAAAGTACGGCAAGATAAATAAAGCAGGCACCACTAATCAAAAGAGGTGCATTCGATCTTGGCTTGTATTTGATTTTATCTCTATCATTCCTTCAGAGCTTGTTAGAAAGCTATCACCTACACCATTGCAGACTTATGGCCTATTCAACATGCTCCGTCTATGGCGTCTTCGAAGAGTTAGTGCATTGTTTTCAAGAGACACCATACAAGCTGCCTCAAGTTTTGCTCAAAGGAATCAATTACCTGTTCGTTTGCAAGACCAAATGCTTGCTCATTTGTGTTTGAAGTTTAGAACAGACTCCGAA 372 0.4274 MDSKAVAQNIISKIAEEVRAHSQKYGKINKAGTTNQKRCIRSWLVFDFISIIPSELVRKLSPTPLQTYGLFNMLRLWRLRRVSALFSRDTIQAASSFAQRNQLPVRLQDQMLAHLCLKFRTDSE 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1301 124 Gene3D - 14 117 - -
Amo04g1301 124 PANTHER POTASSIUM CHANNEL AKT1 37 88 IPR045319 GO:0005249|GO:0006813
Amo04g1301 124 PANTHER K+ TRANSPORTER 1-RELATED 37 88 - -
Amo04g1301 124 SUPERFAMILY Voltage-gated potassium channels 37 88 - -
Amo04g1301 124 PANTHER POTASSIUM CHANNEL AKT1 88 124 IPR045319 GO:0005249|GO:0006813
Amo04g1301 124 PANTHER K+ TRANSPORTER 1-RELATED 88 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1301 Amo-Chr4 62035700 62036455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1301 38 88 Ion Channels AT2G25600 50.980 5.06e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1301 K21867 - gmx:100819491 88.1965