Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1282 ATGTCCCCAACAGGTTCATCAAGATGGAGCCCTACAACTGAACAACTCATGATCTTGGAGGAACTGTATAGGAGTGGGATTAGAACTCCAAGTGCTTCTCAGATTCAACAAATAACGACTCATCTTTCCTTCTATGGAAGGATTGAAGGCAAGAATGTGTTCTACTGGTTCCAAAATCATAAGGCTAGGGATAGACAGAAGCTTAGGAGAAAGCTTAACAAACAGCTCCAGCTACAGCAGCAACTTCAGCTCCATAATGTCCATCACTTCAACCAAGATTTCAGTAACCATTTTCTTGCTGGTTTTGGTTATCCTTCTTGTTCTCCTGTTACCAAACAAGTTCCCTTCTATGCCACTTCTGGTTTGTCTTTTCAGGGAGGAGGAGTAGCTGCATACGCATCGCAAGAAGGGGCGATGAATTGCAAGTGTAGTGTGCATCATAACTCAGAAAGTTTGTTGGAGAAGAATAAAGAGATGAGATTCTTCAATAATAACTATGGTTGGACACTTGGCGGCGATGTTAACCATTATCATGAATCATCATGTTGCACTACTACTAATCAACCTCTCAAGACTCTTGATCTGTTTCCAGTCACATCCACTACCAGAATCAAAGAAGATTGCACCAAGACTCTTGATGGGTGGTAG 648 0.4198 MSPTGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQLQLHNVHHFNQDFSNHFLAGFGYPSCSPVTKQVPFYATSGLSFQGGGVAAYASQEGAMNCKCSVHHNSESLLEKNKEMRFFNNNYGWTLGGDVNHYHESSCCTTTNQPLKTLDLFPVTSTTRIKEDCTKTLDGW* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1282 215 Gene3D - 3 67 - -
Amo04g1282 215 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Amo04g1282 215 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Amo04g1282 215 CDD homeodomain 8 67 IPR001356 GO:0003677
Amo04g1282 215 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Amo04g1282 215 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 210 - -
Amo04g1282 215 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 210 IPR044555 GO:0003700|GO:0099402
Amo04g1282 215 SMART HOX_1 4 71 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1282 Amo-Chr4 60707743 60709505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1282 1 210 Wox Gene Family AT2G28610 40.551 1.13e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Amo04g1282 Homeodomain 7.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1282 - - gmx:102662354 226.098