Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1258 ATGGGTAACCGAATGGGTAAGCTCTGCGTCTGCTCCTCCGACACTGCCGGAGATTTCTCCGGCAGATTCGACAACGGGATAACCTTCCTCTCCGATTCACATGACAAAGCTCTTGGAGACTCCATCTGCTATGTGAGACCAGACAATTCTCACTTCTCCCGTGGCGGCGGCGGCAATGTGTTTTCGGACGGCAGCGCCACCTTCGTTACTTTCCGGTCTGTGTCCGGGGCCACCGTGAGTGCAAACACGTCGTCAACGCCTTCGACCTGCCTTGATGATTCTGTTCAGCAAGAGACAGCTTTGGATTCCTCTGCTTCATTTGAGAGTTCAGGTTCCTTCGCTTCCACAACCATGACAACCTCAATAATGGTGCCTCTGCAACCGCAACAACATTCTCCTGCTGATGGATTCTTTATTCATACCTTTCCAAAGAGCCCGTTGAATAATCGTGTCTCGAACGGTCAATTAGGTGATGAGAAAGCTTATGGTTATGAACATGCCAATAACAAAACATGTGGGCGAAGTTTGAAGAAGTTGCTGAGTGGATCGTTTCTCCCCAAGGAGAAGAGACCGATTTTCAAGAACAACGGGAATGCTAACGCCAGAGTGGGTTGTAGCACAAATTTGAGTGATGAACCAAAGTTTCATAACAACTTGCATTGGGCTCATGGTAGAGCTGGCGAGGATCGTTTACATATCGTGATTTGCGAGGATCATGGGTGGATTTATGTTGGGATTTACGATGGATTCAATGGTCCTGATGCCACTGACTATCTTCTGAACAATTTGTTTTATGCTGTTTATGAAGAACTCAAGAAGATACTGGGTTGTCAAGATTCCAAATCGTTGGTGGATGGTGGTTCTTATTCTTCCTCAAGTTTCAATAAAGAAAACAATCCAATAGGAAATGGAAACTTGAAAGTAGAGAGAAGGAATAGCAGAAATTGCAAGAAAGAGGTGAAACTGAACATAGAAAACATGGTGGAGGCTAAAATGATTCTTGAGAATGCGAAATTGAGTGAGTGGGATGTTTTGCAAGGTCTTTCAAAGGCGCTGAGGATAACGGAGGCTGCGTTTCTTAAGAGTTCAGATGAGATGATAGCTCAAAATCCGGTGTTGGCTATGATGGGTTCTTGTGTGTTGGTTATGTTGATGAAGGGGGAAGATGTGTACTTGATGAATGTTGGAGATAGCCGAGCTGTGTTGGCAACTCATAATGGGAATTCTCTTCAGCTTACTATGGAGCATAGCACTCATGTCAAAGAGGAGGTTCGTAGAATATGGAGGGAGCATCCAGATGACCCTTCTGCTGTAACTAAAGGAAGGGTTAAAGGTTACTTGAATGTCACAAGGGCTTTTGGAGCCGGCTTCCTTAAGCAGCCTAAACAAAACAATGCAGTGTTGGAGACATTCAAAGTGAACTACATTGGAGACTCCCCATACATTACATGCTGCCCTTCACTCCACCACCATAGGCTCGGTCCAAATGACAAATTCCTCTTACTCTCTTCTGATGGAATTTTTCAATACTTCACCAATGAAGAAGCAATTTTTAAAGTGGACTATTTCATCACTATGTTCCCAGACATAGATCCTGCACAACTTCTCATTGAAGAAACACTGCACAGAGCAGCCAAAAAAGCTGGTATGAATTTCCATGAGTTGCTTGATATCCCACAAGGAGAAAGACGACTTTACCATGATGACATTTCTGTTGTCATAATCTCTTTGGAGGGAAAAATATGGCGTTCGACAGTATAA 1761 0.4412 MGNRMGKLCVCSSDTAGDFSGRFDNGITFLSDSHDKALGDSICYVRPDNSHFSRGGGGNVFSDGSATFVTFRSVSGATVSANTSSTPSTCLDDSVQQETALDSSASFESSGSFASTTMTTSIMVPLQPQQHSPADGFFIHTFPKSPLNNRVSNGQLGDEKAYGYEHANNKTCGRSLKKLLSGSFLPKEKRPIFKNNGNANARVGCSTNLSDEPKFHNNLHWAHGRAGEDRLHIVICEDHGWIYVGIYDGFNGPDATDYLLNNLFYAVYEELKKILGCQDSKSLVDGGSYSSSSFNKENNPIGNGNLKVERRNSRNCKKEVKLNIENMVEAKMILENAKLSEWDVLQGLSKALRITEAAFLKSSDEMIAQNPVLAMMGSCVLVMLMKGEDVYLMNVGDSRAVLATHNGNSLQLTMEHSTHVKEEVRRIWREHPDDPSAVTKGRVKGYLNVTRAFGAGFLKQPKQNNAVLETFKVNYIGDSPYITCCPSLHHHRLGPNDKFLLLSSDGIFQYFTNEEAIFKVDYFITMFPDIDPAQLLIEETLHRAAKKAGMNFHELLDIPQGERRLYHDDISVVIISLEGKIWRSTV* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1258 586 CDD PP2Cc 226 577 IPR001932 -
Amo04g1258 586 SMART PP2C_4 212 575 IPR001932 -
Amo04g1258 586 SUPERFAMILY PP2C-like 225 578 IPR036457 -
Amo04g1258 586 Pfam Protein phosphatase 2C 338 525 IPR001932 -
Amo04g1258 586 PANTHER PROTEIN PHOSPHATASE 2C 19 586 IPR015655 GO:0004722|GO:0006470
Amo04g1258 586 Coils Coil 317 337 - -
Amo04g1258 586 Gene3D - 204 583 IPR036457 -
Amo04g1258 586 ProSiteProfiles PPM-type phosphatase domain profile. 202 577 IPR001932 -
Amo04g1258 586 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 19 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1258 Amo-Chr4 59431071 59435696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1258 1 586 PP2C-type Phosphatase Gene Family AT1G07630 41.642 2.66e-158 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1258 - K01102 gmx:100794388 659.062