Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1245 ATGAAAGCAACACTGCTTCTTCTTCTATACTTCTTTCTCGTTTCTTTGCTAGTTTATGCAAAGAAATCCGGCGACGTTACAGCTTTGCAGATCGGCGTGAAGCACAAGCCAGCGTCATGTGATGTCCAAGCACACAAAGGAGATAGAGTCAAAGTACATTATCGGGGGAAACTCACTGATGGAACAGTTTTTGATTCTAGCTTTGAAAGGGATAATCCAATTGAATTTGAGCTTGGTACTGGTCAAGTGATCAAAGGTTGGGATCAAGGATTATTGGGAATGTGCCTGGGTGAGAAGCGGAAATTAAAAATACCTGCTAGTCTTGGTTATGGAGAGCAAGGTTCTCCGCCAACCATCCCAGGTGGAGCAACTCTTATATTTGACACTGAGCTTGTGGGGGTGAATGGAAAAACTTTGGGCGGAGCAGAGGAGTCCGAGCTCTAG 444 0.4482 MKATLLLLLYFFLVSLLVYAKKSGDVTALQIGVKHKPASCDVQAHKGDRVKVHYRGKLTDGTVFDSSFERDNPIEFELGTGQVIKGWDQGLLGMCLGEKRKLKIPASLGYGEQGSPPTIPGGATLIFDTELVGVNGKTLGGAEESEL* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1245 147 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 47 135 IPR001179 GO:0003755
Amo04g1245 147 Gene3D - 17 135 IPR046357 GO:0003755
Amo04g1245 147 SUPERFAMILY FKBP-like 36 136 - -
Amo04g1245 147 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 41 132 IPR001179 GO:0003755
Amo04g1245 147 PANTHER - 6 146 IPR044609 GO:0000413|GO:0003755|GO:0061077
Amo04g1245 147 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP15-2 6 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1245 Amo-Chr4 58545670 58550238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1245 48 133 Calmodulin-binding Proteins AT3G25230 32.967 7.37e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1245 K09569 - gmx:100305479 248.054