Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo04g1243 | ATGGTGGTGGTGATAGAGCAGCAAGAGATCAAGGATCGAAACGCCAATCCCTCCAACGCGGTTGCCGGTAACGACGCTTCTGACGGTTTTGAAACGGCCAGCGACACCGACCTTGGCAGTGACAACGGAGGGGATGACGTCGGATCTAGCAGCCATGATCAACCGCTCGAGCAACCGCAGCAGCAACATCAACAGCAGCAGCTGAAGATAGAACATTTGGAGGCGGAGCCGGAGCAGAGTGTTTCTCCAAGTAATAGTTGCCCTGGGGATCTCTTGATCAATGAGGAGTTGGAGAAGAAAGCAATGGTTCAAGCAAATGAAGCAAAGGCAGAAGGGAACAAGCTTTTTGTGGATGGGAAGTATGAGGAAGCATTATCCCAGTATGAACTTGCTTTACAAGTTGCATCTGACATGTCTTCATTGGTTGAAATACGCTCAATATGCCATGCAAACCGTGCTGTGTGCTTTCAGAAACTGGGAAAATATGACAACACAGTTAAAGAATGCACAAAAGCACTAGATCTGAATCCAGTGTACATTAAAGCTTTAGTAAGAAGAGGAGAAGCTCATGAAAAGCTTGAACATTTTGAAGAAGCCATTGCTGATATGAAAAAGATCTTAGAAATTGATCCCTCAAATGATCAAGCTAGGAAGGCCATCAGGCGACTTGAGCCGCTTGCTGCAGAAAAGCGGGAAATTGATGAAGAGATGATTGCAAAACTAAAAGAAATGGGAAATTCTGTCCTGGGCCGTTTTGGGATGAGTGTCGATAACTTCAAAGCAGTTAAAGATCCAAACACTGGTTCCTATTCTATCTCATTCCAGCGTTAA | 831 | 0.4513 | MVVVIEQQEIKDRNANPSNAVAGNDASDGFETASDTDLGSDNGGDDVGSSSHDQPLEQPQQQHQQQQLKIEHLEAEPEQSVSPSNSCPGDLLINEELEKKAMVQANEAKAEGNKLFVDGKYEEALSQYELALQVASDMSSLVEIRSICHANRAVCFQKLGKYDNTVKECTKALDLNPVYIKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARKAIRRLEPLAAEKREIDEEMIAKLKEMGNSVLGRFGMSVDNFKAVKDPNTGSYSISFQR* | 277 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo04g1243 | 276 | ProSiteProfiles | TPR repeat profile. | 180 | 213 | IPR019734 | GO:0005515 | |
Amo04g1243 | 276 | MobiDBLite | consensus disorder prediction | 1 | 67 | - | - | |
Amo04g1243 | 276 | PANTHER | TETRATRICOPEPTIDE REPEAT PROTEIN 1 | 24 | 276 | - | - | |
Amo04g1243 | 276 | MobiDBLite | consensus disorder prediction | 11 | 67 | - | - | |
Amo04g1243 | 276 | SUPERFAMILY | TPR-like | 104 | 223 | IPR011990 | GO:0005515 | |
Amo04g1243 | 276 | SMART | tpr_5 | 105 | 138 | IPR019734 | GO:0005515 | |
Amo04g1243 | 276 | SMART | tpr_5 | 146 | 179 | IPR019734 | GO:0005515 | |
Amo04g1243 | 276 | SMART | tpr_5 | 180 | 213 | IPR019734 | GO:0005515 | |
Amo04g1243 | 276 | Coils | Coil | 56 | 76 | - | - | |
Amo04g1243 | 276 | Gene3D | Tetratricopeptide repeat domain | 57 | 244 | IPR011990 | GO:0005515 | |
Amo04g1243 | 276 | Pfam | Tetratricopeptide repeat | 150 | 177 | IPR019734 | GO:0005515 | |
Amo04g1243 | 276 | PANTHER | TETRATRICOPEPTIDE REPEAT PROTEIN 1 | 24 | 276 | - | - | |
Amo04g1243 | 276 | Pfam | Tetratricopeptide repeat | 181 | 213 | IPR013105 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo04g1243 | Amo-Chr4 | 58270325 | 58274748 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo04g1243 | 74 | 224 | Calmodulin-binding Proteins | AT3G25230 | 34.911 | 1.48e-15 | 74.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo04g1243 | K24926 | - | gmx:100808386 | 355.91 |