Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1212 ATGGCGGTTCTGAACGCTTTCTCTCTTTCCTTCTTCTTCTTGGTTTTCGTCACTTTTGTTGTTTCCATTTCCAGTGAGCCTCTTCCCCAACCTGTGGTTTCTTCCACTGATGTTGAACTCCTATTGTTCAAAATCAAGTCTTCACTCCAGGGAAACACCAATGGAGAAGAAAACCTTGTCTTATCTTCATGGAACTCTTCAGTTCCACTATGTCAATGGAGAGGTCTCAAATGGATCTTCTCCAGCGGCACACCTTTGTCATGCACTGATCTCTCATCACCACAATGGACCAATCTCTCACTCCACAAAGACCCTTCTCTTCACTTACAATCCCTTCAGCTTCCTTCTGCAAATCTCTCTGGTTCTCTCCCCAGAGAGCTTGGTGAGTTTCCATTGCTTCAAAGCCTCTACCTTAACATTAACTCCTTGAAAGGAACGGTTCCTCTTGAAATTGGTTACAGTACCTCATTATCTGACATTGATTTTGGTGATAATCTTTTGACTGGGCAGATTCCTGCTTCAATTTGGAATCTTTGTGATAGACTTGTTTCTCTTAGGGTTCATGGAAACTCCTTCTCTGGGAATGTTCCAGAACCTGCATTGCCTAACTCTTCTTCTTGTAAGAGTCTTCAGTTTCTTGATTTGGGTGATAACAGATTCTCTGGGGAGTTTCCTGAGTTTGTTACTAAGTTTGGTGGGTTGAAGCAGCTTGATTTAGGGAACAATATGTTTGTTGGTTCAATTCCTCAGAGCTTAGTTGGGCTAAAGCTTGAAAAATTGAACCTTTCTCATAATAACTTCAGCGGGGTTTTGCCAGTTTTTGGGCAGAACAAATTTGGGGTTGATGTGTTTGAAGGGAATAGTCCTGACTTGTGTGGACCACCTTTGAGAAGTTGCACCAGGAACTCTGCACTGAGTTCTGGTGCAGTTGCTGGCATAGTTATTAGTCTTATGACTAGTGCAGTTGTTTTGGCTTCTTTGTTGATTGGTTATATGCAGAACAAGAAGAGGAAGGGTAGCGGAGAGAGTGAAGATGAGTTGAATGACGAAGAGGAAGATGATGAGAATGGTGGTGGTGGTGGGGCTGGTGATGGTGATGGGGGGGAAGGGAAGCTTATGATATTCAGCGGCGGCGAGAATTTGACATTGGATGATGTGTTGAATGCAACTGGACAAGTCATGGAGAAGACATGTTATGGGACTGCTTATAAGGCGAAGCTTGCTGATGGGAGCACCATTGCTTTGAGGTTGTTGAGGGAAGGTAGCTGCAAGGATAGGAACTCATGCTTGCCGGTTATAAAGCAGTTGGGCAAGATTCGACATGAGAACTTGATTCCTTTGAGAGCCTTCTATCAGGGAAAGAGAGGCGAGAAGCTCCTTATTTATGACTATTTTCCTCTTAGAACCCTTCATGAGCTTCTTCATGAAACTAAAGCAGGAAAACCAGTGCTTAACTGGGCTAGGCGACACAAGATCGCATTGGGAATAGCGAGAGGGCTGGCCTATCTTCATACAGGACTTGATGTACCGATCACTCATGCGAATGTAAGATCCAAAAATGTGCTAGTGGACGACTTCTTTGTTGCGAGGGTCACTGACTTTGGCCTTGATAAGCTGATGGTTCCTTCCATAGCCGACGAAATGGTAGCACTTGCTCGGGCAGACGGCTACAAGGCTCCGGAACTTCAAAAAATGAAGAAATGCAATTCCAGGACTGATGTTTATGCATTTGGTATACTGCTGCTGGAGATTTTGATTGGGAAGAAGCCAGGGAAAAACGGAAGAAACGGAGAGTTTGTTGACTTGCCTGCGATGGTGAAAGTGGCGGTTTTGGAAGAGACAACAATGGAAGTGTTCGATGTGGAGCTCTTGAAAGGAATAAGAAGTCCAATGGAAGATGGCATGGTGCAGGCACTGAAGCTGGCGATGGGATGCTGCGCACCGGTGGCGGCAGTTAGGCCGAGCATGGAAGAAGTTGTGAGGCAGTTGGAGGAGAACAGACCAAGGAACAGGTCTGCATTGTACAGCCCTACAGAAACAAGAAGTGGAAGTGTTACCCCGTTTTGA 2067 0.4519 MAVLNAFSLSFFFLVFVTFVVSISSEPLPQPVVSSTDVELLLFKIKSSLQGNTNGEENLVLSSWNSSVPLCQWRGLKWIFSSGTPLSCTDLSSPQWTNLSLHKDPSLHLQSLQLPSANLSGSLPRELGEFPLLQSLYLNINSLKGTVPLEIGYSTSLSDIDFGDNLLTGQIPASIWNLCDRLVSLRVHGNSFSGNVPEPALPNSSSCKSLQFLDLGDNRFSGEFPEFVTKFGGLKQLDLGNNMFVGSIPQSLVGLKLEKLNLSHNNFSGVLPVFGQNKFGVDVFEGNSPDLCGPPLRSCTRNSALSSGAVAGIVISLMTSAVVLASLLIGYMQNKKRKGSGESEDELNDEEEDDENGGGGGAGDGDGGEGKLMIFSGGENLTLDDVLNATGQVMEKTCYGTAYKAKLADGSTIALRLLREGSCKDRNSCLPVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYFPLRTLHELLHETKAGKPVLNWARRHKIALGIARGLAYLHTGLDVPITHANVRSKNVLVDDFFVARVTDFGLDKLMVPSIADEMVALARADGYKAPELQKMKKCNSRTDVYAFGILLLEILIGKKPGKNGRNGEFVDLPAMVKVAVLEETTMEVFDVELLKGIRSPMEDGMVQALKLAMGCCAPVAAVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSVTPF* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1212 688 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 7 688 - -
Amo04g1212 688 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 7 688 - -
Amo04g1212 688 MobiDBLite consensus disorder prediction 669 688 - -
Amo04g1212 688 MobiDBLite consensus disorder prediction 337 367 - -
Amo04g1212 688 MobiDBLite consensus disorder prediction 663 688 - -
Amo04g1212 688 Gene3D Ribonuclease Inhibitor 205 303 IPR032675 -
Amo04g1212 688 ProSiteProfiles Protein kinase domain profile. 388 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1212 688 SUPERFAMILY L domain-like 74 274 - -
Amo04g1212 688 Gene3D Ribonuclease Inhibitor 37 203 IPR032675 -
Amo04g1212 688 SUPERFAMILY Protein kinase-like (PK-like) 397 664 IPR011009 -
Amo04g1212 688 Pfam Leucine rich repeat 209 267 IPR001611 GO:0005515
Amo04g1212 688 MobiDBLite consensus disorder prediction 345 359 - -
Amo04g1212 688 Pfam Protein tyrosine and serine/threonine kinase 396 663 IPR001245 GO:0004672|GO:0006468
Amo04g1212 688 Gene3D Transferase(Phosphotransferase) domain 1 467 676 - -
Amo04g1212 688 Gene3D Phosphorylase Kinase; domain 1 373 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1212 Amo-Chr4 55559367 55562151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1212 13 688 Receptor kinase-like Gene Family AT3G24660 70.901 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo04g1212 PK_Tyr_Ser-Thr 4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1212 - - gmx:100814814 1074.31