Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1173 ATGATGACTATTGAGGAAATGGCTGGGATGGATGTCCTATGCAGTGATAAAACTTTAACATTGACAATGAATAAGCTCAGTGTTGATAGAAACTTGATTGAGCTATTTACTAAAGGTGTTGAGAAGGAGCATGTTATCCTTCTTACTGCAAGGGCCTCTAGGACCGAATATCAAGATGCTATAGATGCTGCAATTGTTGGGATGTTTGCTGATCCAAAGGAGGCTCAAGCCAGAATCAGGGGGGTCCATTTTCTTCCATTCAATCCTATAGACAAGAGGACTACTCTAACTTACATTGATTTTCATGGAAATTGGCACCGTGTGAGCAAAGGAGCTCCGGAGCAGGAAAAACTTGTTTCATTGGCAGCTTCTTATGATGGTTATAAGGATGATAAAGGCTTAATTTCTTCTCTCTTTATTTACATCAGAACCTTTTGCAACTGCAAAAAAGGATGTTAG 459 0.3965 MMTIEEMAGMDVLCSDKTLTLTMNKLSVDRNLIELFTKGVEKEHVILLTARASRTEYQDAIDAAIVGMFADPKEAQARIRGVHFLPFNPIDKRTTLTYIDFHGNWHRVSKGAPEQEKLVSLAASYDGYKDDKGLISSLFIYIRTFCNCKKGC* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1173 152 Gene3D - 11 25 IPR023214 -
Amo04g1173 152 PANTHER CALCIUM-TRANSPORTING ATPASE 1 115 - -
Amo04g1173 152 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 20 115 IPR023299 GO:0000166
Amo04g1173 152 PANTHER PLASMA MEMBRANE ATPASE 1 115 - -
Amo04g1173 152 Gene3D - 26 115 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1173 Amo-Chr4 53108759 53111236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1173 1 115 Primary Pumps ATPases AT2G24520 76.522 2.78e-58 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1173 K01535 - adu:107484756 306.99