Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1150 ATGGAGTTAACTCCAAGGAGTTTAACTCCAATGAGTTTGACTCCAAGGAGTTTAACACCAATGAATTTGACACCAAGGGGAAGAACACAAGGGCATGTGTTGAACTATGACAGAGATGCAGATTCATTTGTGGAGGAAGATAAGGAGCTTCAGTCAAAGTGGGCTGCAATTGAGAAATTGCCAACTTTCAAAAGGATTAAAACTTCTTTTGTTGATGTTAGTCAGGAGAGTGTGGTTCTAGGAGCAAGAAGCAGCAGCAGAAGAGAAGTAGATGTTACAAAGCTTGGAGCGGTCGAAAAGCGTCTRTTCATTGACAGGCTCATCAAGCATATTGAGAATGACAACCTTCAATTGCTCCAGAAGCTTAGGGAAAGAATGGAAAGAATTGACAAATGWTSGTTTTTCAGAGTCAATGTGAAGTTACCAAGTGTGGAGGTRAAGTACACGAACCTAAGTGTTGAAGCAGAATGTGAGGTTGTTCAAGGGAAGCCACTCCCTACTTTATGGAACTCCTTGTCTAGCCAACTCTCAGGTTTTGTGAAGACTATATCATGCACTACTCAAGGAGCCAATATAAGCATTCTGAATGATGTTAGTGGCATCATAAAGCCATCAAGGCTCACTCTTCTTCTTGGTCCACCAGGGTGTGGGAAAACGACCTTGTTAATGGCACTGGCTGGGAAACTAGAGCAATCTCTCAAGGTTTCTGGAGAAATATCTTACAATGGTCAGAATCTAGATGAATTTGTACCTCGAAAAACATCAGCTTACATAAGCCAGTATGACCTGCACATTCCTGAGATGACAGTGAGAGAAACAATCGACTTTTCAGCACGCTGTCAAGGAGTTGGAAGCAGGGCTGACATGGTAGCTGAAATCACCAGGAGGGAAAAGGAAGAAGGAATCATCCCTGATCCTGATATCGATACCTATATGAAGGCAATTTCAGTTGAAGGACAAAGTGAAAATCTTCAGACAGAATATGTTTTGAAGATTCTGGGACTGGATATCTGTGCGGACGTACTAGTTGGTGATGCATTAGAGAGAGGAATTTCAGGTGGACAGAAGAAAAGGCTAACTACAGGAGAGATGATTGTTGGTCCAATCAAAACTCTTTTCATGGATGAAATATCAACTGGCTTGGACAGCTCAACAACTTTCCAAATAGTTACTTGTCTCCAGCAGTTGGTGCACKTCACTGATGCAACTGCAGTGCTTTCACTCCTTCAACCAGCACCTGAAACCTTTGAATTATTCGATGATCTCATATTGATGGCAGAGGGGAAGATAGTATACCACGGCCCARGCAGTCAAGCACTCCAGTTTTTCAAGGATTGTGGTTTCTGGTGCCCAGAAAGAAAAGGGGTTGCAGACTTTCTTCAAGAGGTAATATCCAAGAAGGATCAAAGTTATGTCTCAGTGGATCAGTTCTCCGAAATCTTCAAAAGCAGTTACTGGGGACGGATGCTAGGTGATGAGCTTGCACAMCCATTTGATAAATCTCAATCTCATAAAAATTCTTTATCACATAGCGTGTACTCCTTGGGAAAGTGGGAAATCTTTAAAGCTTGTATGAGGAGAGAACTTCTTCTCATGAACCGGAACTCATTTATCTATGTATTCAAAACTGCCCAGCTTACAATCACCGCAATCATCACAATGACGGTGTTCTTACGGACTCAACATGGCGTGGACTTGATAAGTTCAAACTATTTATTGGGATCATTGTACTATACACTCGTCCGCCTCATGACTAATGGAGTTGCTGAGCTGATCATGACCATTACTAGGCTTCCTGTTGTTTATAAGCAGACAGCATTCTATCTTTATCCGGCATGGGCTTATTGTCTTCCAGCTTCCCTTATAAAGATTCCATTTTCGTTTCTTGATGCCATTGTTTGGACATCAGTGACATATTATGTTATTGGCTACAGCCCTGAAATAACAAGGRAAGCAATTTTGTTTCTCCGCCAGTTTATTTTGCTTGTTGCTCTMCATATGTCATCAACCTCCATGTGCCGTTTCCTTGCTGGAGTTTTCAAAACTGATGTTGCAGCCACAACTGTTGGCTCCTTGGTTTTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGACCATCATTACCATGGTGGTTGAGATGGGGATTTTGGCTTTCTCCCATGACATATGGGGAAATAGGAATAACACTAAATGAATTTCTCGCTCCTCGCTGGCAGATCAAAGATGGAAACACCACCGTGGGAAGGAGGGTTCTAAGTGATCGTGGTTTAGACTTTGAGAGCAACTTCTACTGGATATCAATTGGAGCCTTGCTTGGTTTCGCAGTAGTTTTTGATTTTGGATTTATCCTAGCATTAACTTACTTAAAACAGCCTAAGGCATCTCGAGCCTTAGTTTCAAAAAAGAAGGTATCTCAACTAAATGGAGAAGAAAATAGCAATAGCGTGGAGCTCAAAAATAAATCAGTTGCAGTTGATATTGGCAGCACATCAAATGAAACTCAAAGCACAGGGAAAATGGTCCTGCCCTTTCAGCCTCTGACAATAGCATTTAAGGATGTCCAGTATTTTGTTGAAACCCCACCGGAYATGAAAAAGCATGGGTCAAATGAGAAAAGARTACAATTGCTCTGTGATATCACCGGYGCCTTTAGGCCAGGAGTTCTCACTGCACTAATGGGAGTAAGTGGAGCAGGYAAGACAACTCTCATGGATGTCCTTTCAGGAAGGAAAACTGGAGGTATCATTGAAGGAGATATCAGAATTGGAGGATACCCCAAAGTGCAGAAGACATTTGCGCGAGTTTCAGGTTATTGTGAGCAGAATGACATACATTCTCCATATATAACAGTTGAAGAATCTGTCACATACTCGGCTTGGTTGCGGTTGCCGATGGAGATTGATACAGCAACAAAAGGGAAATTTGTTGAAGAAGTGCTTGAAACAATTGAACTTGATGACATAAAAGACAGTTTAGTTGGCATTCCTGGCCAAAGTGGCTTGTCAACTGAACAACGCAAAAGARTAACCATTGCAGTGGAGCTTGTTTCCAATCCATCAATAATCTTTATGGATGAACCAACCTCAGGCTTGGATGCCCGAGCAGCCGCAGTGGTTATGCGTGCAGTGAAGAATGTTGTTGGCACTGGCAGGACAACGGTTTGCACCATACACCAACCAAGCATTGACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAAGCTGGAGGACGGATTATTTATAGCGGAATGCTGGGCCATCATTCAAATAAACTGATTGAATATTTTCAGAATATACCTGGGGTGCCAAAGATAAAAGACAACTATAATCCTGCAACCTGGATGTTGGAAGCTACCTCTGCATCTATCGAACAAGAACTTAAAATTGACTTTGCAACAATCTACAAAGAATCACACCTTTACAGGGAAACTATTCAAATGGTGGAGGAGTTAAGTAAACCAGTGCCAGGTTCAAGCGACTTGCACTTTTCAACTCCTTTCCCACAGAATACCTTGGGGCAGTTCATGGCATGCCTTTGGAAGCAACACTTGTCATATTGGAGAAGTCCTGAGTACAACTTAACACGTTTTATTTTCATGGTTGTTGCAGCAGTAATATTTGGGGCAGTATTTTGGCAGAAAGGGAAAGAAATAAACAATCAGCAAGACTTGTTCAATATATTTGGATCAATGTATATTGCTGTAATATTCTTGGGCGTAAATTACTGTTCAACAATTCTGCCATATGTGGCAACCGAGCGCTCAGTCTTGTACCGAGAAAAATTTGCTGGAATGTATTCTTCCATAGCTTATTCATTTGCACAGGTGGCCATTGAAATACCTTATATCTTAGTGCAAGCAATTTTATATTGGTCAGTTGCAAAAGTCTTTTGGTACTTCTACACCACATTTTGCACATTTTTGTACTTTGTATATCTTGGAATGCTGATAATGTCGTTGAGCACAAATCTGGATATAGCTTCTGTATTGTCAACTGCAGTCTACACCATATTCAATCTCTTCTCTGGATTCCTCATGCCAGGACCTAAAATTCCTAAATGGTGGGTRTGGTGCTACTGGATTTGCCCAACAGCATGGTCCCTGAATGGACTCCTAACATCACAATATGGGGACATGGACAAGGAGATAACCATATTTGGGAAGAAAGAACAAGTTGGTGCATTCCTAAAAGATTACTATGGGTTCAGGCATGACAGATTAAGCCTTGCGGCAGTAGTGCTCATTGCTTTCCCAATTWTTTATGCRTCTCTCTTTGCCTATTGCATAGGCAAAATGAATTTCCAAAAGAGATAG 4323 0.4122 MELTPRSLTPMSLTPRSLTPMNLTPRGRTQGHVLNYDRDADSFVEEDKELQSKWAAIEKLPTFKRIKTSFVDVSQESVVLGARSSSRREVDVTKLGAVEKRLFIDRLIKHIENDNLQLLQKLRERMERIDKXXFFRVNVKLPSVEVKYTNLSVEAECEVVQGKPLPTLWNSLSSQLSGFVKTISCTTQGANISILNDVSGIIKPSRLTLLLGPPGCGKTTLLMALAGKLEQSLKVSGEISYNGQNLDEFVPRKTSAYISQYDLHIPEMTVRETIDFSARCQGVGSRADMVAEITRREKEEGIIPDPDIDTYMKAISVEGQSENLQTEYVLKILGLDICADVLVGDALERGISGGQKKRLTTGEMIVGPIKTLFMDEISTGLDSSTTFQIVTCLQQLVHXTDATAVLSLLQPAPETFELFDDLILMAEGKIVYHGPXSQALQFFKDCGFWCPERKGVADFLQEVISKKDQSYVSVDQFSEIFKSSYWGRMLGDELAXPFDKSQSHKNSLSHSVYSLGKWEIFKACMRRELLLMNRNSFIYVFKTAQLTITAIITMTVFLRTQHGVDLISSNYLLGSLYYTLVRLMTNGVAELIMTITRLPVVYKQTAFYLYPAWAYCLPASLIKIPFSFLDAIVWTSVTYYVIGYSPEITRXAILFLRQFILLVALHMSSTSMCRFLAGVFKTDVAATTVGSLVLVLMFLFGGFILPRPSLPWWLRWGFWLSPMTYGEIGITLNEFLAPRWQIKDGNTTVGRRVLSDRGLDFESNFYWISIGALLGFAVVFDFGFILALTYLKQPKASRALVSKKKVSQLNGEENSNSVELKNKSVAVDIGSTSNETQSTGKMVLPFQPLTIAFKDVQYFVETPPDMKKHGSNEKRXQLLCDITGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYPKVQKTFARVSGYCEQNDIHSPYITVEESVTYSAWLRLPMEIDTATKGKFVEEVLETIELDDIKDSLVGIPGQSGLSTEQRKRXTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVGTGRTTVCTIHQPSIDIFETFDELILMKAGGRIIYSGMLGHHSNKLIEYFQNIPGVPKIKDNYNPATWMLEATSASIEQELKIDFATIYKESHLYRETIQMVEELSKPVPGSSDLHFSTPFPQNTLGQFMACLWKQHLSYWRSPEYNLTRFIFMVVAAVIFGAVFWQKGKEINNQQDLFNIFGSMYIAVIFLGVNYCSTILPYVATERSVLYREKFAGMYSSIAYSFAQVAIEIPYILVQAILYWSVAKVFWYFYTTFCTFLYFVYLGMLIMSLSTNLDIASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLNGLLTSQYGDMDKEITIFGKKEQVGAFLKDYYGFRHDRLSLAAVVLIAFPIXYASLFAYCIGKMNFQKR* 1441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1150 1440 Pfam ABC-2 type transporter 410 464 IPR043926 GO:0140359
Amo04g1150 1440 Pfam ABC-2 type transporter 1060 1121 IPR043926 GO:0140359
Amo04g1150 1440 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 22 1440 - -
Amo04g1150 1440 CDD ABCG_PDR_domain2 848 1086 IPR034003 -
Amo04g1150 1440 Pfam ABC transporter 881 1031 IPR003439 GO:0005524
Amo04g1150 1440 SMART AAA_5 888 1080 IPR003593 -
Amo04g1150 1440 SMART AAA_5 204 429 IPR003593 -
Amo04g1150 1440 Pfam Plant PDR ABC transporter associated 743 801 IPR013581 -
Amo04g1150 1440 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 851 1103 IPR003439 GO:0005524
Amo04g1150 1440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 876 1086 IPR027417 -
Amo04g1150 1440 Gene3D - 865 1099 IPR027417 -
Amo04g1150 1440 PANTHER ATP-BINDING CASSETTE TRANSPORTER 22 1440 - -
Amo04g1150 1440 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 180 452 IPR003439 GO:0005524
Amo04g1150 1440 Pfam ABC-2 type transporter 521 735 IPR013525 GO:0016020|GO:0140359
Amo04g1150 1440 Pfam ABC-2 type transporter 1177 1378 IPR013525 GO:0016020|GO:0140359
Amo04g1150 1440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 452 IPR027417 -
Amo04g1150 1440 Gene3D - 180 487 IPR027417 -
Amo04g1150 1440 MobiDBLite consensus disorder prediction 1 31 - -
Amo04g1150 1440 Pfam ABC transporter 195 377 IPR003439 GO:0005524
Amo04g1150 1440 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1150 Amo-Chr4 51788271 51796474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1150 851 1063 Calmodulin-binding Proteins AT2G36910 26.754 9.89e-07 51.6