Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1107 ATGGAAGAAGAGAGTGAATCGGTAAGAGTAAAGGACATCATTCTGAAGCGGAAGATCGGAAATGGGTCGTTCTCGGTGGTGTGGAGGGCGGAGCACAGAGGCACCGGCGAAGAGGTGGCAGTGAAACAGGTGTTCCTCTCCAAACTCAACCTTCGCCTTAAGTCATCGTTCCACTGCGAGCTCAATTTCTTGTCCTCCGTCAACCACCCCAACATCGTTCGCCTCCTTGATTTCTTCCAGTATGATGGATGTGCGTACTTGGTGATGGAGTTCTGTGCTTGA 282 0.5106 MEEESESVRVKDIILKRKIGNGSFSVVWRAEHRGTGEEVAVKQVFLSKLNLRLKSSFHCELNFLSSVNHPNIVRLLDFFQYDGCAYLVMEFCA* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1107 93 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Amo04g1107 93 ProSiteProfiles Protein kinase domain profile. 13 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1107 93 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 7 93 - -
Amo04g1107 93 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 7 93 IPR045269 GO:0004674|GO:0006914
Amo04g1107 93 Pfam Protein kinase domain 16 92 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1107 93 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Amo04g1107 93 SUPERFAMILY Protein kinase-like (PK-like) 9 92 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1107 Amo-Chr4 48819003 48822042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1107 12 91 Core Cell Cycle Gene Families AT1G66750 38.272 3.39e-12 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Amo04g1107 Pkinase 9.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1107 - - aip:107621035 169.088