Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1070 ATGGCACAAAATAAGACAGGTAACAAATTAGGTGCCAACACTGCAAAGGACCTTGGTGTGCTTCCTCAACACATCCAGCCTGAGTTAGGTTGTGGTTCAGATACAGGACAGATTGTGTATAATAATATTGTTCTAGCCACTGGAAGAGGATTTTCAGAGAATATCAGTCATGATGGAGTTTCTGCAGGAAGAGTTCCTCATTCACCTGATATATCTCAAAGTTCTGAGCATAGATTTATGTTGAATAGGGAGAATGGCCATGTGAGATATGAAGAACTTAGTAATATTTTAGGCTTGAGGAGAATGGACTCTGAGAATGCTGCTGAGATGGATGAAATTCCCTCTCTAAACAAGCAGGATCAGGAGATGAAAAATGGGGTTCCTGGAGTCAGTTTAAGAAAAACGGTACCTGGAGATCGTGATACAAGGAACAGAGTTCAATCATCGACTGGTGATCATCCTGGTGCCAGACCAGTTGTATCACCCCTTCTCAGATGTGAGTCTTCTCATTCTAATGGATTTTCTGTTTCAGGAACTTTGGATGATTCTTTGCCATGGAAAATGAAGCTTCTATGCAGCTCTGGTGGAAAAATATTACCCAGGCCTAGTGACGGGAAACTCAGATATGTAGGGGGAGAGACCCGCATAATATCTACAAGAAAGGATTTATCATGGGAAGAGCTTGTAAAGAAGACCTCGAGTATTTGTAGGCAACCTCACACAATCAAATACCAGCTTCCTGGGGAGGATCTGGATGCTCTAATATCTGTTTCCTCGGAGGAGGATCTTCAAAATATGACAGAGGAATACCATGGGTTTGAAAGGCGTGAAGGTTCTCAAAGACTTAGAATTTTTTTGGTTCCTTTGACTGAATCTGAAGAGACGCCGTTAACTGAAGTGAGCATGATTCAGCAAAGTGATCCTGACTACCAATATGTTGTTGCCGTGAATGGCATAGCAGATCCCAGTCCAAGGAACAACAATGGTGGGATGAGTTTGACCAATGAAGCAAGTCAGTTCGCTCCAGTTTTTCAGAAAATTTCTCCAAATCCCTCTTCTGCCTTTGAGAACAAGGGTGCTGTTAATTCTTTAAATGGAGATGGGGTTCTGAACAAATCAGTTTCTCCTATTCCTATACAGGTATCAGGTTCTAGTGCAGGTTATGTTCCATTTATTGGTAATGAACGGTTTCAGGGAAGTACCGAGAGCAATGTGTCATTTGTTACTGCTCTGCTACCCCCTGAGAACTCTGGCACCGTCATTGCTGATTGGCAATACCCTCAGCATGCAGCTGCTGGTCAGTCCAAGATACTCAATGGACAGCATTTCGGCAACTACAATCTTGGCAAGGGATTTGTGACTCATGGTTGCGAGGATAAATTATTTGGTGAAAGGCTGTTTCAAAGGGAAAAGGGAAACTACCTTGGAAATCCTCTTTCATGCTTGGAAGATCCAATTTGTCAACAAGCTGAATCTGATGGAATTTCTGGTTCCCCCTATGGGCTGTCACATGCTTTTTCTGATTCACAATTGCATGAGAGTGCTGTTAGGTCTGGTTACTGCTCACAAGAAAGAATTGGCCAATCTTTTTCCTTGAACCTTGAAAATACTCAATTATCTTCAATCCTTCTTTCTAATATCTCACAAGGGAATCCTTTGGAGCTTCAACGTGATCCTATTCTCCACCATACCCAACTACAAAGTAAGATACCAAAAGGTGACTCCGCCGAGCTGTCCAAAAGGCAAGAAATGACATCTTCTTCTCCATATTCAGATTCATTAGGAATGAACTGTGATGTTTATAATGGTAGCATTTCAACTGAAAATAGGTACCCTAAAGCACAGTCCAGATTAACTGACTATAGCTTTGTAGCAAATGATATTCAAGATAACTCTGTTAAATTAGAAAAGATGAAGATAATTGAAGAGTTTAATTGCTTTCCGAGTAATAATGGAAATGTTTATGTTGAGAAACCAGCCATCATTGATATGGGAAACATGAGTGAATTGCATCTTTTGGACTCCTTCCTTCCTAGTAACTCAAATTCTCAGGTTAATGTGCAAAAGAATTGGGAGGTTACATCTGAGGATAGAATTCCTGCATCATCTGGTATGGCGGAACTTTCTCCAAATAATATCGTGGACAAGATCCCATCTGATCTTCTTGATATGAGCCAAAGGACTGATGATAGCAAGAAATGTGCATTAGCTGAAGGTTTGAGCGGGAAACAAGATATTGACTTTTCATTGACCAGGATATTTGATTTAAATGCCCCATTAAAAGACGAAGAAAGCTCTTCTGGCAAAAGTAATCTGGGCAATAATTTCTTTGAGCTATCCATTAACCCAGACTCTCTTAAATGTGCACCAATTCAGCTTTCTGAGAACCAACTGGCTTCAGGATTTCATGAAAATTCAACACTAAGCGCTGCTAGATTGCACCCTGCTTCACCTCCTGTTGGTTATGGTCCAAAGTTCAACTTGCCAATGAATGTGAATACTGCAGGCGAGAATAGTTCTTTTAGAAAGGCACGTTCTTTCTTTGATGACTCGGTGAGCAGTACAGATCAAATCATTGATCTGTCAGATCCGTCAAAGAATATACAATGGTGTCACGAGGCAAGCCGGGTACAGCCATTTGTAGTAGTAGACAATGTGATTAGTGTTTCTCCTCCAAATGTTGAGTCTTCATTGGTACAGAGCCCAAATTCTGTGGATGATAGAGGAAGTGATGTTGGATCCCTTGCTCATACAGAAGCAGAAAGCATCCTCCCAGAGTCTGAACTGGAGGATTTTAAAGACAATCAAACAGACAAGCATGACTTCCTTTCTGATGCAATGATAGCAGAAATGGAAGCCAGCATATATGGTTTGCAGATAATAAGGAATGCTGATCTCGAAGACCTTTTGGAGTTAGGATCTGGTACTTATGGAACCGTTTATCATGGAAAATGGCGGGGAACAGATGTTGCTATAAAGAGAATTAAAAGGAGCTGCTTTGCAGGGAGATCTTCTGAGCAAGAACGGTTGGCAAAAGACTTCTGGAGAGAGGCACAAATCCTCTCAAATCTTCACCATCCAAATGTGGTGGCATTTTATGGAATAGTACCAGATGGGGTTGGCGGAACCTTAGCAACAGTAACAGAGTTCATGGTTAATGGTTCTCTTAGGCATGTCCTCATCAAGAAAGAAAGATTACTAGATCGTCATAGAAAGCTGATAATTGCCATGGATGCAGCTTTTGGTATGGAATATTTGCACTCGAAAAACATTGTCCATTTTGATTTGAAATGTGACAACTTGCTTGTGAATCTAAGGGATCCACAGCGACCCGTATGCAAAGTTGGAGATTTTGGATTATCAAGGATCAAACGAAATACACTTGTGTCTGGGGGTGTACGAGGAACCCTTCCATGGATGGCACCAGAGCTGTTGAATGGCAGCAGTAGCCGGGTTTCTGAAAAGGTTGATGTTTTCTCCTTTGGCATCTCATTGTGGGAGTTATTCACAGGGGAGGAACCATATGCAGACATGCATTGTGGTGCCATTATTGGGGGGATTGTAAAGAACACTCTTCGACCACCTATTCCGGAACGCTGTGATCCTGAATGGAGGAAGCTAATGGAAGAGTGCTGGTCAGCTGACCCCAACAGCCGACCATCATTCACGGAGATAACCAGCAGGTTACGATCCATGTCTATAGGACTTCAAGTAAAGGGAACTGGTTAA 3729 0.4181 MAQNKTGNKLGANTAKDLGVLPQHIQPELGCGSDTGQIVYNNIVLATGRGFSENISHDGVSAGRVPHSPDISQSSEHRFMLNRENGHVRYEELSNILGLRRMDSENAAEMDEIPSLNKQDQEMKNGVPGVSLRKTVPGDRDTRNRVQSSTGDHPGARPVVSPLLRCESSHSNGFSVSGTLDDSLPWKMKLLCSSGGKILPRPSDGKLRYVGGETRIISTRKDLSWEELVKKTSSICRQPHTIKYQLPGEDLDALISVSSEEDLQNMTEEYHGFERREGSQRLRIFLVPLTESEETPLTEVSMIQQSDPDYQYVVAVNGIADPSPRNNNGGMSLTNEASQFAPVFQKISPNPSSAFENKGAVNSLNGDGVLNKSVSPIPIQVSGSSAGYVPFIGNERFQGSTESNVSFVTALLPPENSGTVIADWQYPQHAAAGQSKILNGQHFGNYNLGKGFVTHGCEDKLFGERLFQREKGNYLGNPLSCLEDPICQQAESDGISGSPYGLSHAFSDSQLHESAVRSGYCSQERIGQSFSLNLENTQLSSILLSNISQGNPLELQRDPILHHTQLQSKIPKGDSAELSKRQEMTSSSPYSDSLGMNCDVYNGSISTENRYPKAQSRLTDYSFVANDIQDNSVKLEKMKIIEEFNCFPSNNGNVYVEKPAIIDMGNMSELHLLDSFLPSNSNSQVNVQKNWEVTSEDRIPASSGMAELSPNNIVDKIPSDLLDMSQRTDDSKKCALAEGLSGKQDIDFSLTRIFDLNAPLKDEESSSGKSNLGNNFFELSINPDSLKCAPIQLSENQLASGFHENSTLSAARLHPASPPVGYGPKFNLPMNVNTAGENSSFRKARSFFDDSVSSTDQIIDLSDPSKNIQWCHEASRVQPFVVVDNVISVSPPNVESSLVQSPNSVDDRGSDVGSLAHTEAESILPESELEDFKDNQTDKHDFLSDAMIAEMEASIYGLQIIRNADLEDLLELGSGTYGTVYHGKWRGTDVAIKRIKRSCFAGRSSEQERLAKDFWREAQILSNLHHPNVVAFYGIVPDGVGGTLATVTEFMVNGSLRHVLIKKERLLDRHRKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSSRVSEKVDVFSFGISLWELFTGEEPYADMHCGAIIGGIVKNTLRPPIPERCDPEWRKLMEECWSADPNSRPSFTEITSRLRSMSIGLQVKGTG* 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1070 1242 MobiDBLite consensus disorder prediction 120 158 - -
Amo04g1070 1242 ProSitePatterns Protein kinases ATP-binding region signature. 972 993 IPR017441 GO:0005524
Amo04g1070 1242 PRINTS Tyrosine kinase catalytic domain signature 1085 1103 IPR001245 GO:0004672|GO:0006468
Amo04g1070 1242 PRINTS Tyrosine kinase catalytic domain signature 1048 1061 IPR001245 GO:0004672|GO:0006468
Amo04g1070 1242 PRINTS Tyrosine kinase catalytic domain signature 1200 1222 IPR001245 GO:0004672|GO:0006468
Amo04g1070 1242 PRINTS Tyrosine kinase catalytic domain signature 1156 1178 IPR001245 GO:0004672|GO:0006468
Amo04g1070 1242 Gene3D - 206 288 - -
Amo04g1070 1242 SUPERFAMILY CAD & PB1 domains 203 290 - -
Amo04g1070 1242 SMART PB1_new 202 289 IPR000270 GO:0005515
Amo04g1070 1242 MobiDBLite consensus disorder prediction 894 908 - -
Amo04g1070 1242 PANTHER SERINE-THREONINE PROTEIN KINASE 105 1241 - -
Amo04g1070 1242 Gene3D Transferase(Phosphotransferase) domain 1 1054 1238 - -
Amo04g1070 1242 SMART serkin_6 966 1233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1070 1242 CDD PB1_UP2 191 286 - -
Amo04g1070 1242 Pfam PB1 domain 204 288 IPR000270 GO:0005515
Amo04g1070 1242 CDD STKc_MAP3K-like 972 1229 - -
Amo04g1070 1242 MobiDBLite consensus disorder prediction 567 590 - -
Amo04g1070 1242 MobiDBLite consensus disorder prediction 894 914 - -
Amo04g1070 1242 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1091 1103 IPR008271 GO:0004672|GO:0006468
Amo04g1070 1242 ProSiteProfiles Protein kinase domain profile. 966 1234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g1070 1242 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 105 1241 - -
Amo04g1070 1242 Pfam Protein tyrosine and serine/threonine kinase 971 1229 IPR001245 GO:0004672|GO:0006468
Amo04g1070 1242 Gene3D Phosphorylase Kinase; domain 1 959 1053 - -
Amo04g1070 1242 SUPERFAMILY Protein kinase-like (PK-like) 954 1228 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1070 Amo-Chr4 46696729 46705251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1070 184 319 MAP Kinase Kinase Kinase AT1G16270 57.971 2.00e-38 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Amo04g1070 PK_Tyr_Ser-Thr 2.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1070 - - gmx:100809991 1455.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2295 14 85175004 85183664 Amo04g1070 04 46696729 46705251 hybridization