Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1060 ATGGTTTTGCAGATTGACAAAGAGCTTCTTCCGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGATGGGGCTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGCAGGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGAGTTTTCTATTTCCCTCAGGGTCACATTGAATTGTTGCCAGAACCTACAGAACAATATTTGAGGCAGATGAAGAACCAGAAATCTCCCAAATACGATCTTCCGTCGATAAGATATTTAAAGAACAAGATTTTTTTCTCTTCTATCAGAAGGTTAATAACTTTTATTAGAAGATACTTATGTAGGATACAATATTTTGGTTTTTTATAG 390 0.3615 MVLQIDKELLPEVVNMGFDRNQLVESLCNRIQNEMGLVMICLKSYGGCAGPLMDVPCVQDRVFYFPQGHIELLPEPTEQYLRQMKNQKSPKYDLPSIRYLKNKIFFSSIRRLITFIRRYLCRIQYFGFL* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1060 129 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 4 27 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1060 Amo-Chr4 45696947 45698005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1060 45 96 B3 DNA Binding Superfamily AT5G62000 53.846 8.40e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1060 K14486 - ahf:114925841 196.052