Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1034 GATATTGAAATCATGGAAAATAGTTCAGGAATTTCAACAACATTGTTCATCACCTTTTTACTACTAATTCCTTCTTGTTGTGTTATCTTTGTGAATTGCAAAACCCTTGAAAGTTCATCACTATCACTAGATTTGACGATCCCAGACATTTTAGGGTTCTTAGACGAGAGACTAGCTCTTATATTCCCAATAATTCAAGCATTCAAGACCACAATAACTTCTGACCCGTTGGGTATAACCTCAACATGGAGTGGTCCAAACATATGCAACTACACTGGCTTCTACTGCGACAACCCACCGGACAACAAAACCGCCGTAACCGTCGCATCCATAGATTTCAACGGCTTCCAGCTCTCCGCTCCGTCCCTCGACGGCTTCATAGACCAGCTCTCGGACTTGGCAATATTTCACGCCAACTCCAACAACTTCTCTGGCACCATTTCTCCGAACGTAGCAAAACTAAAGTTCCTGTACGAACTGGACTTGAGTAACAACCTCCTCTCCGGCGTGTTCCCCGTTTCCGTTCTCAACATGCCCACATTGTCCTTTCTCGACATAAGGTACAATTTGTTTTCCGGAACAGTGCCACCCAGCATATTTACCCAAGCTTTGGACGTACTTTTTCTGAACAACAACAATTTTGCCCTGACTCTTCCCAACAACTTAGGGGACACAAAGGCTCTCTACCTCACTCTCGCAAACAACAAATTCACCGGCCCCATTCCACGAAGCATCAGAAAAGCCTCGGCCACGCTGACCGAGGTTCTCTTCCTCAACAACCTCCTGACCGGTTGCCTGCCCTATGAGATCGGGTTCTTGAAAAAGGCCACCCTCTTCGACGCCGGAAACAACCTCCTCACAGGGCCGTTGCCGTCCTCCTTGGGCTGCTTGGAGAGCGTGGAGCAGCTAAACCTAGCCAGGAATCAGTTGTACGGACAAATTCCGGAAGTGGTGTGCGCACTTGGTAACTTGGCGAATTTGTCACTGTCCTATAACTACTTCACCAAGGTGGGACCACTGTGCAGGAATATGATTAAGAAGGGTGTTGCTGATGTGAGGAAGAACTGTATTTCGGGGCTTCCGAATCAGAGATCGGCGCAGGAGTGTTTTGCGTTTTTCTTGTCGCGGAGAAGTTGCGGGAACCCGGCGTGGTTTAACTTCTTACCGTGTAAGATTCCGCCGTGGAAGAAACCTAATAGTGAGAGCAATAGTACAGTAACAACGACGACGAAGAGGAATTTGCTTTCATATTCTGCTCCTTTCAGAAATAGATTGCTTTTGTAG 1284 0.4712 DIEIMENSSGISTTLFITFLLLIPSCCVIFVNCKTLESSSLSLDLTIPDILGFLDERLALIFPIIQAFKTTITSDPLGITSTWSGPNICNYTGFYCDNPPDNKTAVTVASIDFNGFQLSAPSLDGFIDQLSDLAIFHANSNNFSGTISPNVAKLKFLYELDLSNNLLSGVFPVSVLNMPTLSFLDIRYNLFSGTVPPSIFTQALDVLFLNNNNFALTLPNNLGDTKALYLTLANNKFTGPIPRSIRKASATLTEVLFLNNLLTGCLPYEIGFLKKATLFDAGNNLLTGPLPSSLGCLESVEQLNLARNQLYGQIPEVVCALGNLANLSLSYNYFTKVGPLCRNMIKKGVADVRKNCISGLPNQRSAQECFAFFLSRRSCGNPAWFNFLPCKIPPWKKPNSESNSTVTTTTKRNLLSYSAPFRNRLLL* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1034 427 Gene3D Ribonuclease Inhibitor 253 372 IPR032675 -
Amo04g1034 427 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 12 420 - -
Amo04g1034 427 Gene3D Ribonuclease Inhibitor 202 252 IPR032675 -
Amo04g1034 427 Gene3D Ribonuclease Inhibitor 64 201 IPR032675 -
Amo04g1034 427 SUPERFAMILY L domain-like 72 358 - -
Amo04g1034 427 PANTHER SCOPOLETIN GLUCOSYLTRANSFERASE 12 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1034 Amo-Chr4 43711801 43715005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1034 44 380 Leucine-rich Repeat extension Gene Families AT3G24480 46.018 1.69e-93 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1034 - - gmx:100813314 576.63