Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1026 AGTAAAAGCCTTGCTCGTGGTATGCCGCAAAAGAAATTTTACGTACTCATTAGTGGTTTAGATACAAAATTGGCTAATGCAACTGACAGACACGCTATTCTGTGCAAGATAGGAACAATTGAACAAGAGAAGGCAAAGGAAAAAATACTGGTTTGTAGTAGAGGCGAGACCGCGAGAGTGGAGAAGAGCCTTGTGGCTATGGAGGCTGGTGCATTCAGAATAATTCTTTGCAACGATAAGTTCAGTGAGTGGTGCAGTTTTGTGGAAAGTACAATCTGGTTCAATTTCAGGAGTTGTTTAAAGAAGGAGTGGTGGAACATGGGTTGTTTTTGA 333 0.4144 SKSLARGMPQKKFYVLISGLDTKLANATDRHAILCKIGTIEQEKAKEKILVCSRGETARVEKSLVAMEAGAFRIILCNDKFSEWCSFVESTIWFNFRSCLKKEWWNMGCF* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1026 110 SUPERFAMILY PA domain 33 84 IPR046450 -
Amo04g1026 110 CDD PA_subtilisin_like 20 82 - -
Amo04g1026 110 Gene3D - 1 96 - -
Amo04g1026 110 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 83 IPR045051 -
Amo04g1026 110 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 3 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1026 Amo-Chr4 42229287 42229706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1026 3 82 Subtilisin-like Serine Gene Family AT5G59810 48.750 1.26e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1026 - - ahf:112722783 121.324