Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1019 ATGAATAATCTTTTCTTCATTATCTGCTTTTGCTTATGCATTCAAACCCATGCATCAGCTTCTTCGAATTCTTCCAAATCAAACACACAGTTTCCAAAAGAAGCTCACCCCACAATATCAGGTTACCTTTCTATCAGCAAAACCTCTTCTTCCGCCTTCTTCTACACTTTCTATGAAGCTCAGAACTCGACCTTGCCTCTCTCCAAAACCCCGCTTCTCATTTGGCTCCAAGGTGGCCCTGGAAGCTCCTCCATGATTGGCAGCCTCTATGCGGTTGGACCATGGCGTATCACAGAATCCATCACGTTTGAACCCAACCCTGGTGCTTGGAACAAGTTCTTTGGCGTTCTCTTTCTTGATAACCCCATTGGCACTGGATTCAGTATAGCCTCATCACCGCAAGAGATCCCAACGAATCAAGAAGGTATTGCCAAACACCTTTATGTTGCTCTTACAAGGTTTCTTCAACTTGATCCTGTTTACAAACACCGCCCTATTTATATTGTTGGCCAAAGTTATGGAGGAAAGTATGCGTCTACAACTGGAAATTACATATTGAAAAGAAATGCACGGTTGCATGCTTCTAAAAGAGTGAATCTTGTTGGTGTGGCTATTGGGAATGGAATAATTGAGGCAGTGACCCAATCCCGCACGCATCCTGCTAATGCTTATTATGAGGGTCTGATCAATGCGAGGCAAAAAAGTGAGTTGGAGAAGGATCAACTGGAAATAGTTAGGTTGGCACAGATTCGGCATTGGAGTGAAGCAACGATTGCATGGCGAAGACTCCAGGGGAAGTTGCAAAACATGTCTGGGCTGGCTACTTTGTATGATTACACAAGGAAAGATCATCCTTATCACTATCAAGATTGGGTTACTCAATTCTTGAATATAGCTGAAGTGAAGAAGGCATTGGGCGTGAACGAAACTCAAGTGTTTAAATCGAGCAGCAGTAATGTTGGGGAAGCATTGCTAGGAGATATAATGAAGAGTGTGAAGTTTATGGTGGAGGAGTTGTTGAAGAGCAACACTATTAGGGTGTTGTTGTACCAAGGTCAACTTGATTTGGTTGCTGGTCCGGTTCAAACTGCGGCATGGGTGAATAATATGAAATGGGAAGGGATTGAGGAGTATGTGAATGCAGAGAGGAAGATATGGAGGGTGAATGGAGAGCTTGCTGGCTATGTCCAACAATGGAAGTCACTCACCAATGTTGTTGTCTTGGGTGGTGGCCATCTTATGGCTGCTGACCAGCCTGTTAATGCTCAGACAATGATACAAGATTGGGTCTTGCAAAGGGGTTTGTATCAAAATGTGTAA 1320 0.4371 MNNLFFIICFCLCIQTHASASSNSSKSNTQFPKEAHPTISGYLSISKTSSSAFFYTFYEAQNSTLPLSKTPLLIWLQGGPGSSSMIGSLYAVGPWRITESITFEPNPGAWNKFFGVLFLDNPIGTGFSIASSPQEIPTNQEGIAKHLYVALTRFLQLDPVYKHRPIYIVGQSYGGKYASTTGNYILKRNARLHASKRVNLVGVAIGNGIIEAVTQSRTHPANAYYEGLINARQKSELEKDQLEIVRLAQIRHWSEATIAWRRLQGKLQNMSGLATLYDYTRKDHPYHYQDWVTQFLNIAEVKKALGVNETQVFKSSSSNVGEALLGDIMKSVKFMVEELLKSNTIRVLLYQGQLDLVAGPVQTAAWVNNMKWEGIEEYVNAERKIWRVNGELAGYVQQWKSLTNVVVLGGGHLMAADQPVNAQTMIQDWVLQRGLYQNV* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1019 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 106 118 IPR001563 GO:0004185|GO:0006508
Amo04g1019 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 129 IPR001563 GO:0004185|GO:0006508
Amo04g1019 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 179 IPR001563 GO:0004185|GO:0006508
Amo04g1019 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 402 415 IPR001563 GO:0004185|GO:0006508
Amo04g1019 439 PANTHER CARBOXYPEPTIDASE 20 433 - -
Amo04g1019 439 Pfam Serine carboxypeptidase 37 430 IPR001563 GO:0004185|GO:0006508
Amo04g1019 439 SUPERFAMILY alpha/beta-Hydrolases 36 431 IPR029058 -
Amo04g1019 439 Gene3D alpha/beta hydrolase 15 437 IPR029058 -
Amo04g1019 439 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 433 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1019 Amo-Chr4 41195678 41196997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1019 297 430 Calmodulin-binding Proteins AT2G22960 25.185 1.58e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1019 K09645 - gmx:102663282 568.926