Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1001 ATGCTCAGCCAAGCACACACCAAGTGGGCCCGGAATGACGAAGGTGAAAACTGGAGTGTAGGGCAGTGCCAACTCTTTTGTCTAGGAAGAGTACTTTTAAGAGGAACAGAATTCTTGTGCTGGATAGATGAAGCTACTTCCTCCATTGATTCCACCACCGGCGCCATTTTACAACGAGTTATCAGAGAAGAATTATCAGAATGCATAGTTATAATGGTGGCTCACAGAGTTCCAAACGTAATAGATAGTGACATGGTCATGGTCCTGTCTTATGAATATTGGTCCAACTGTAATAGGAATGTTATCCAAAAAGACTAG 318 0.4277 MLSQAHTKWARNDEGENWSVGQCQLFCLGRVLLRGTEFLCWIDEATSSIDSTTGAILQRVIREELSECIVIMVAHRVPNVIDSDMVMVLSYEYWSNCNRNVIQKD* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1001 105 PANTHER BNAA01G25250D PROTEIN 12 99 - -
Amo04g1001 105 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 90 IPR027417 -
Amo04g1001 105 Gene3D - 2 102 IPR027417 -
Amo04g1001 105 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 12 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1001 Amo-Chr4 40022050 40024056 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1001 13 89 Calmodulin-binding Proteins AT2G36910 29.870 3.43e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1001 - - ahf:112777795 134.42