Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0982 ATGGAGAGTGGTGAGAGAGAATGTTACTACAGAATTCTTGGTGTGAGTTCTGATTCTTCGTTTCAAGAGATAAAGCGTGCTTACAGGAAGCTTGCTATGCAATGGCATCCAGATAGGTGGACAAAAAATCCTTCTTTGCTAGGGGAAGCCAAGCGCAAGTTCCAACAAATTCAAGAAGCTTATTCAGTATTGTCTGATCAAAAGAAAAGAACGATGTACGATGCTGGGTTGTATGATCCTGAGGAGGAAGAGGATGAGGGATTTTTTGAATTTGTGGAAGAAATGGTGTCCCTTATGGCCCAAGTGAGACAAGAGGAGAAGGAGTGTGGGCTTGAAGATTTGCAGTCCATGTTCATGGAAATGCTTGAAGGATTCAAGTCTCCTACCATGTATTGCTCCATGCCTTCTTCGTCGATGTTCGAGTTTGATGAATCCCCGTGCGCGAAAAAGGAAGCTAAAAGGATGCGTTTGGATACAAGCATGATGGATAAAACAGGGTCACATTTTCAAGCACCAGCTAGCCTTAACTTTGTATAA 537 0.4283 MESGERECYYRILGVSSDSSFQEIKRAYRKLAMQWHPDRWTKNPSLLGEAKRKFQQIQEAYSVLSDQKKRTMYDAGLYDPEEEEDEGFFEFVEEMVSLMAQVRQEEKECGLEDLQSMFMEMLEGFKSPTMYCSMPSSSMFEFDESPCAKKEAKRMRLDTSMMDKTGSHFQAPASLNFV* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0982 178 Pfam DnaJ domain 9 74 IPR001623 -
Amo04g0982 178 SMART dnaj_3 7 69 IPR001623 -
Amo04g0982 178 PRINTS DnaJ domain signature 10 28 IPR001623 -
Amo04g0982 178 PRINTS DnaJ domain signature 28 43 IPR001623 -
Amo04g0982 178 PRINTS DnaJ domain signature 49 69 IPR001623 -
Amo04g0982 178 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 162 - -
Amo04g0982 178 Gene3D DnaJ domain 2 98 IPR036869 -
Amo04g0982 178 PANTHER PUTATIVE, EXPRESSED-RELATED 4 162 - -
Amo04g0982 178 ProSiteProfiles dnaJ domain profile. 8 77 IPR001623 -
Amo04g0982 178 ProSitePatterns Nt-dnaJ domain signature. 54 73 IPR018253 -
Amo04g0982 178 CDD DnaJ 8 66 IPR001623 -
Amo04g0982 178 SUPERFAMILY Chaperone J-domain 6 80 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0982 Amo-Chr4 38592153 38594326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0982 5 75 C2H2 Transcription Factor Family AT1G74250 47.222 3.77e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0982 - - aip:107639293 330.487