Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0960 ATGGGAAGAGGAACAACAACAACCAACTCCCTGTTCTTTTCGTCACTACTCTTATTACTATTTTCTCTCTTGTTCCAAAACGGCGTCGTTTACGCTCAAGAAAAGATAGCATCGTCAGAGGAAGAAGCATTGGGCTTATTTCAAGAAAGAGAGACACTTGAAATCATCATAGGAGGTGGAAGTACACCTTCCCCTTCACCTTCCCCTGCACCTACTCCACCCGATTATACGCCATGCCCTCCGCCACCGAAACCGCTGAGCCGCTTGGACAAAGCGCGAAAAGTGCTCCTCAACTTCACCAACTACATCGTAGACCCAAATCGTTTCACCAGTAACTGGTGCACGCAGACATTTAACACGTGCAATTTCCACGGAATTCGGTGCGCCACATACCCAGGCTCAAACGAACCTGCAGTTGCAGGGTTAGACCTCAACCAAGCCGGAATCTATGGCCGCAACAACAAACCTCTTTCCCTCTCTGGAATCTTGGACAGAATTCCAGAACTCACATTCTTCCATGTTAACTCCAACAACTTCTCCYGTTCCGTACCAAAGGAAATWATCAGTTACGGCTTTTTCTTCGAGCTTGATCTTAGCAACAACAAGCTTRGTGGTCAGTTTCCAATGGAAACGCTTAAGAACAAGAACCTAGTGTTCTTGGACCTCAGGTTCAACAACCTCYCCGGCCCGATTCCATGGCAACTATTCGAAATGGATCTCGACGTGATTTTCATCAACAACAACAAGTTCAACCAGTTCCTCCCCCAGAATTTCGGAAATACCCCCGCAAGGTACCTGACCTTTGCCAACAATCAATTATGCGGTCCSATACCAAGGAGCATCGGCAAGGCAGCCAACACTCTGACGGAGGTGCTCTTCCTTGGGAACAGGTTTGATGGCTGCTTGCCGTACGAAATCGGAAACCTAAAGAAAGCAGTTGTGTTTGATGTGAGCATGAACCAATTAACAGGTCCAATACCGTACTCGTTTGGTTGCTTGAGGCAGATTCAATTCTTGAATCTTGCGAAAAACAAATTCTACGGTGCGGTTCCGGAGAACGTTTGCAAGCTTCCGGGGCTGATTAATAACGGAAACTTGACCCTGTCAAACAACTACTTCACAGAGGTTGGTCCTGAATGCAGGAAATTGATAAAGTCAAGGGTTTTGGATTTGACCAATAACTGTATTCCGGGTTTACCGAACCAGAGGCCGCAAAAAGAGTGTTGGGAGTTTCTTCATAGTGTGAAGCCTTGTCCCAATGAGAAGTATCTTTTGAGTTATGCACCTTGTGCGGGATGGAAGGAAACTGAGAACACGGAGGAGGTGGCAGCGGCGCCGGAGCCTGTTACTTATAACGCGCTCAAACCGCACCGGTTGAGACTTTGA 1386 0.4711 MGRGTTTTNSLFFSSLLLLLFSLLFQNGVVYAQEKIASSEEEALGLFQERETLEIIIGGGSTPSPSPSPAPTPPDYTPCPPPPKPLSRLDKARKVLLNFTNYIVDPNRFTSNWCTQTFNTCNFHGIRCATYPGSNEPAVAGLDLNQAGIYGRNNKPLSLSGILDRIPELTFFHVNSNNFSXSVPKEIISYGFFFELDLSNNKLXGQFPMETLKNKNLVFLDLRFNNLXGPIPWQLFEMDLDVIFINNNKFNQFLPQNFGNTPARYLTFANNQLCGPIPRSIGKAANTLTEVLFLGNRFDGCLPYEIGNLKKAVVFDVSMNQLTGPIPYSFGCLRQIQFLNLAKNKFYGAVPENVCKLPGLINNGNLTLSNNYFTEVGPECRKLIKSRVLDLTNNCIPGLPNQRPQKECWEFLHSVKPCPNEKYLLSYAPCAGWKETENTEEVAAAPEPVTYNALKPHRLRL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0960 461 MobiDBLite consensus disorder prediction 57 86 - -
Amo04g0960 461 Gene3D Ribonuclease Inhibitor 89 263 IPR032675 -
Amo04g0960 461 PANTHER BNAC05G26270D PROTEIN 34 447 - -
Amo04g0960 461 MobiDBLite consensus disorder prediction 64 86 - -
Amo04g0960 461 Gene3D Ribonuclease Inhibitor 264 416 IPR032675 -
Amo04g0960 461 SUPERFAMILY L domain-like 92 397 - -
Amo04g0960 461 Pfam Leucine rich repeat N-terminal domain 91 128 IPR013210 -
Amo04g0960 461 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 34 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0960 Amo-Chr4 36639385 36641310 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0960 88 412 Leucine-rich Repeat extension Gene Families AT3G24480 41.590 1.27e-72 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0960 - - cam:101512430 506.523