Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0931 ATGGATGATTCAACCTCAGATTGTCAGCTGAATCAGGGCGAAGTAGATTATGAATTTGAATCTAACGAAGTTTCTGAGCCTCTCTCTGTTGTTGATGACCAGTTTGTTTCCAAGGTTGGAATGACATTTACCACCCTTGAAGATGCTGGAAAATTTTACAAGAACTATGCCAAGACTGCAGGGTTTTCTACAAGAGTTCGGAGCACAAATAGGAAGGAAAACGAGATTAAGAATCAATTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCGAAAAGGCAAATCCAACAGCCGTTTTAAACTATCCTGCAAGAATTTATATACACACATTGAAGGATGTTGGTGCTTGGATCATTTCAAAGGTTGTGCTGAATCATTCACACCCTTGCTATCCAAGTAAATCAGAGATGCTCAAACAGCACAGGGAACTAAGCATCCATTCGTCGTACAATAGAGAATAA 477 0.392 MDDSTSDCQLNQGEVDYEFESNEVSEPLSVVDDQFVSKVGMTFTTLEDAGKFYKNYAKTAGFSTRVRSTNRKENEIKNQLITCSREGKWKSKISPTEKANPTAVLNYPARIYIHTLKDVGAWIISKVVLNHSHPCYPSKSEMLKQHRELSIHSSYNRE* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0931 158 Pfam FAR1 DNA-binding domain 51 136 IPR004330 -
Amo04g0931 158 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 38 148 - -
Amo04g0931 158 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 38 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0931 Amo-Chr4 33000205 33001011 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo04g0931 FAR1 3.7e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0931 - - adu:110278638 263.077