Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0915 GTTGAAAAATTAAAGACTGAGAAGGAGCTTCAACGAGCTAAGTCTGAAATTCTTAGGAGAAAATTGAAAATCAGGGATCTATTTTGGAATTTGGGTTTATTGTGTGCTGAAGGAAAGCTTCTAGAGTCTTTGTTTGATTCCGAAGGAGCAATACGCAGTGACGATATTTTCGGTGCAAAATACGGGTCCAAAGAGCTGACCACTGATAATGATATAATTCTCTGTGATAGTGCTTGTGACCGTGGATTTCACCAATGCTGTTTAAGGCCTCCATTGTTAACTAAAGACAGATATGGTTGGTATAAAGACGGAGATCACGGTCGTGGCTGTGGCCGTGGCCGAAAGGGGACGCCTAGACATTTTACTGGTCACCCACTTGACTTACATGCAGATCCATACACTCTCATTGGGTCATCATCAGGCACGACTGTTCCGACTAGTGGGAGACCGCCACCTATTGCTACTACTACCCCCTCTCGTTAG 483 0.4431 VEKLKTEKELQRAKSEILRRKLKIRDLFWNLGLLCAEGKLLESLFDSEGAIRSDDIFGAKYGSKELTTDNDIILCDSACDRGFHQCCLRPPLLTKDRYGWYKDGDHGRGCGRGRKGTPRHFTGHPLDLHADPYTLIGSSSGTTVPTSGRPPPIATTTPSR* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0915 160 PANTHER HOMEOBOX PROTEIN HAT3.1 1 96 - -
Amo04g0915 160 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 101 IPR013083 -
Amo04g0915 160 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 1 96 - -
Amo04g0915 160 Coils Coil 1 21 - -
Amo04g0915 160 MobiDBLite consensus disorder prediction 137 160 - -
Amo04g0915 160 SUPERFAMILY FYVE/PHD zinc finger 68 101 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0915 Amo-Chr4 32650660 32651837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0915 1 100 Homeobox Transcription Factor Family AT3G19510 65.385 4.54e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0915 - - adu:107488674 182.185