Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0876 ATGGAGAGAGAGGACGAAGATGCGACGCAAGAGAGGAGGCTGTTCCGCCGTGCACTGTCGTCGCTCCTGGGGTCGATTGAAGCCGCCGCCGYAGCTAGGGCTTGCCGGAACAATGCTGATCGATTCCTGCATTGGAGCACTAGGTTCCAAATTGTTCTAGGCGTGGAAAGGGGATTGCAGTACCTTCATGAGGATTCACATCTAAGAATTGTTCACCAAGACATCAAAGCAAGCAACATTCTTCTTGATCATAAGTTTCATCCCAAGATTGGAGACTTTGGCCTTGCCAGGTTCTTCCCTGAAGACCAAGCTTATCTTAGCACACAATTCGCTGGAACATTCGCCAAAAGGGTTGTTTTCGCCGGAACCAGAACATTATCAAGGACCAAAGCTAAAAGTTGCCATCATTGGAGCTGGGCTTTCTGGCATGTCAACTACAGTGAAACTCTTGGATCAAGGACACGA 465 0.4882 MEREDEDATQERRLFRRALSSLLGSIEAAAXARACRNNADRFLHWSTRFQIVLGVERGLQYLHEDSHLRIVHQDIKASNILLDHKFHPKIGDFGLARFFPEDQAYLSTQFAGTFAKRVVFAGTRTLSRTKAKSCHHWSWAFWHVNYSETLGSRTR 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0876 155 PANTHER RECEPTOR-LIKE KINASE 41 114 - -
Amo04g0876 155 Pfam Protein kinase domain 50 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g0876 155 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 41 114 - -
Amo04g0876 155 SUPERFAMILY Protein kinase-like (PK-like) 41 114 IPR011009 -
Amo04g0876 155 ProSitePatterns Serine/Threonine protein kinases active-site signature. 70 82 IPR008271 GO:0004672|GO:0006468
Amo04g0876 155 ProSiteProfiles Protein kinase domain profile. 1 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g0876 155 Gene3D Transferase(Phosphotransferase) domain 1 24 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0876 Amo-Chr4 29362205 29363371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0876 43 114 Receptor kinase-like Gene Family AT1G70530 59.722 5.36e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo04g0876 Pkinase 2.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0876 - - ahf:112703114 266.159