Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0874 ATGTCACTGCCACCGTCGCCGCCGTCTTATCGCTGTCGGGAGAGTAATAACCGTCGCCGCCACTGGAGGGGAGCCTGGCTGTCCTCGTCACTGCCAGCTCCGTCGCCGTCGTCACCATTGGAGCTGCGCGAAGCCGTCGTCGCCGTTGTCACCATCGATGCTTCTCGTTGTCGTTTGTGGGTTGTCGCCTCTTCTGCTTCTGCTGTCACGCTGTCGTCTGCCCCTCTGGACATCGCTGCTTTTGAATCGTGTCCTGTCACTCGGATATGCTGCAAGAAGCTATCAGAAAGTGGCATTGATGAGAAGAAGCACAAACCCTCCACCAGCAATACCGCTGCCTCTAAATCCAAGGACGGAATGGAAGATTACAATTTTGCTATGAAGAGGATGATGAGGAATCCTTATGAGTATCACCACGATCTGGGTTTGAATTACACACTTATAACTGACAATCTCATTGTGGGATCCCAACCACAGAAACCTGAAGACATCGATCACCTCAAGAAGGAAGAGGGGGTGACATACATTCTGAATTTGCAGCAAGATAAGGATATCAAGAGTGGTTCCTCCACTGAGTTTCTCAATCATTTCCAAAATTGCCCTGCTTGGGGTCATAGGATGTTCATCACAGATGCTGGGCTATGCTGGAATTAG 654 0.5046 MSLPPSPPSYRCRESNNRRRHWRGAWLSSSLPAPSPSSPLELREAVVAVVTIDASRCRLWVVASSASAVTLSSAPLDIAAFESCPVTRICCKKLSESGIDEKKHKPSTSNTAASKSKDGMEDYNFAMKRMMRNPYEYHHDLGLNYTLITDNLIVGSQPQKPEDIDHLKKEEGVTYILNLQQDKDIKSGSSTEFLNHFQNCPAWGHRMFITDAGLCWN* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0874 217 Gene3D Protein tyrosine phosphatase superfamily 127 210 IPR029021 -
Amo04g0874 217 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 86 186 - -
Amo04g0874 217 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 86 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0874 Amo-Chr4 29037760 29038973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0874 106 186 Protein tyrosine phosphatase (PTP) family AT3G10940 75.309 1.12e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0874 - - aip:110271941 315.464