Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0861 ATGAAACCCATGTTGCTCCCAGGAGGTTGCTTTGCTCTTGTGGAGGGCAGAGCAGGGAAGCCTTGCATGTGGATCCAACTAGCGTGCCAAATTGGGAGGGGCATCAGGATGCTGCCCTGCCCTTGTGGAGGGCAGGGCAATGTTGTCATGGTGCGTCCAAGCTGCGCGCCCAAGCTCCCTTGCTGTGCGTGCTGGCCGTGCCAATTTGTGTGCCATGCACCAAGAAATGCTGCCCTGCCTCCACAAGGGCAGGGCAGCGCAAGCTTTCCTTGTTCTTGGGAGTCCGAAACTGCTCTTGAGGAGGGCAGGGCAGAGATTTTCCTTCTCTCATTTCTTGGCCTAGAATTGTGCTCCGCCCTCAAGGAGGGCAGGGCAGTAATGATTATTTCACTAAGTGAATCAACACCTAGTAGTTCAACAATTGAGGCTCCACTGACTATACATGCTTCAGTTTGCAATTCATCTAAAACTTCTAACAAGGGCATACAATCCTCTAGTTTAATGCAAAGAACAGAGATTATTTTTTTGGTTACTATTAAGAGACAGACACTGCCAGCTGTATCATTGACCGATAATATTAAAATCAAGGGATTAGATGGTAGCAACATGGCTTCTAAAAAGCGGAAAATAGCATGGTCAGAGGAAAAGGACAATCTGCTACGAGATGTTGTTCAAAGATTTGGTGAAGGGCATTGGGCTACCATTGCAAAAGGAGGCAATGTTCCTGTTAAAAGGACTGCTAAACAGATAGATCAAAAGAAATATGTTATTAGAGGTAGCAATGGTTGCAAGGTTGGAGACGATAACAACAGCCTGGTCCTGATGTGGGAAGATGGGTTTTGCCAAGGAAGGAGTGCAAGTCTGGTGGAAGACATGGATGGAGGAGGAGAGGATCTAGTGAGAAAGGCCTTTAGCAAGATGTCCATTCAGTTATATAATTATGGAGAAGGATGGCCATATAAATTGCCAAGAAAATGGCCGCTAAAAATTACATATTTTTTTGCGGCCATTAAAAAAGTCTTTACCGGCAAATGTTATAATTGCCACTAA 1050 0.4552 MKPMLLPGGCFALVEGRAGKPCMWIQLACQIGRGIRMLPCPCGGQGNVVMVRPSCAPKLPCCACWPCQFVCHAPRNAALPPQGQGSASFPCSWESETALEEGRAEIFLLSFLGLELCSALKEGRAVMIISLSESTPSSSTIEAPLTIHASVCNSSKTSNKGIQSSSLMQRTEIIFLVTIKRQTLPAVSLTDNIKIKGLDGSNMASKKRKIAWSEEKDNLLRDVVQRFGEGHWATIAKGGNVPVKRTAKQIDQKKYVIRGSNGCKVGDDNNSLVLMWEDGFCQGRSASLVEDMDGGGEDLVRKAFSKMSIQLYNYGEGWPYKLPRKWPLKITYFFAAIKKVFTGKCYNCH* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0861 349 Pfam Myb-like DNA-binding domain 211 251 IPR001005 -
Amo04g0861 349 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 128 258 - -
Amo04g0861 349 Gene3D - 201 258 - -
Amo04g0861 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 204 260 IPR017930 -
Amo04g0861 349 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 128 258 - -
Amo04g0861 349 ProSiteProfiles Myb-like domain profile. 204 253 IPR001005 -
Amo04g0861 349 SUPERFAMILY Homeodomain-like 207 253 IPR009057 -
Amo04g0861 349 CDD SANT_TRF 212 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0861 Amo-Chr4 28020036 28023961 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo04g0861 Myb_DNA-binding 5.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0861 - - adu:107461104 217.624