Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0831 ATGGAGAACATTCTGGGTCTCATCAAATTACGCATCAAAAGAGGCACTAACCTCAAACCTTGTGATAGTGATTCCAGTGACCCTTATGTCCTTGTCACCTTGGAGGAAACGAAACTGAAAACTCGTCATGAGAAAGATAGCTTGAATCCGGAGTGGAATGAAGAATTGACACTCTATATTAAGGATGTTAATATTCCCATTCATCTTACGGTTTGTGACAAAGACACTTTCACGAAGGACGACAAGATGGGCGAAGCGGATATCGACTTGAAGCCATATCTTCTGTGTGTGAAGGTGGGATTAAGCGAGCTGCCAGAGGGCCATGTGGTGAAGAGGATTGAACCAAATGACTCTAACTGCCTTGCTGAAGAGAGCAAGATCATATGGACTAATGGGAAAGTAATCCAATATATGACCTTAAAATTGAGAAATGTTAACACTGGTGAGCTTCATGTGGAAATTGAGTGGCTTGATGTTCCTGAATCCAAGGGCTTATCTGGGGTTCCACTTTAG 513 0.425 MENILGLIKLRIKRGTNLKPCDSDSSDPYVLVTLEETKLKTRHEKDSLNPEWNEELTLYIKDVNIPIHLTVCDKDTFTKDDKMGEADIDLKPYLLCVKVGLSELPEGHVVKRIEPNDSNCLAEESKIIWTNGKVIQYMTLKLRNVNTGELHVEIEWLDVPESKGLSGVPL* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0831 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Amo04g0831 170 Gene3D C2 domain 5 165 IPR035892 -
Amo04g0831 170 Pfam C2 domain 7 92 IPR000008 -
Amo04g0831 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 167 IPR044562 -
Amo04g0831 170 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 167 - -
Amo04g0831 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 158 IPR035892 -
Amo04g0831 170 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0831 Amo-Chr4 26567811 26569514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0831 38 166 C2H2 Transcription Factor Family AT1G70790 54.198 1.40e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0831 - - gmx:100781585 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1925 14 46663276 46665002 Amo04g0831 04 26567811 26569514 hybridization