Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0816 ATGGACCAAGATATTGCGTCAAGGTCCCGGCTGCTGAGGAAAAGGGGCAAAACAAGGAAGTTCAAATATTCCTGGAAGTCTGCTGGCCATCCATCAATATGGAAAAGAATTGCTGATGGGAAAAATCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGTCAATGTGTGGAAAGCAATGCCCTTGTGCTAATGTTGGAAATTGCTGTGAAAAATACTGTGGTTGTTCAAAGAGCTGCAAAAATCGGTTTAGAGGATGCCATTGTGCCAAGAGTCAGTGCAGAAGTCGCCAATGCCCATGCTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGTCGAAATTGCTGGGTTAGTTGTGGGGATGGTTCATTAGGGGAGCCCCCTCGTCGTGGAGATGGTCAATGTGGAAATATGAGGCTTCTCTTGAGGCAGCAACAGAGGGTTAGCAACCATGAGCTTGTTTGTTTAATATTTTCTGCATTCCATTCTTATTTTTATGAATAA 507 0.4438 MDQDIASRSRLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCPCANVGNCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGDGQCGNMRLLLRQQQRVSNHELVCLIFSAFHSYFYE* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0816 168 SMART CXC_2 82 119 IPR033467 -
Amo04g0816 168 Pfam CXC domain 86 117 IPR041355 -
Amo04g0816 168 ProSiteProfiles CXC domain profile. 34 133 IPR026489 -
Amo04g0816 168 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 2 149 - -
Amo04g0816 168 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 2 149 IPR045318 GO:0006338|GO:0018024
Amo04g0816 168 Gene3D SET domain 48 155 IPR046341 -
Amo04g0816 168 SUPERFAMILY SET domain 18 148 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0816 Amo-Chr4 26313515 26319797 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Amo04g0816 preSET_CXC 2.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0816 - K11430 gmx:100808730 320.857