Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0793 ATGCTTGTTAGTAGCGGCAATAGCCAAAGACACAGACAAATCTCATGTCCACCAAGAATGGCTTACCGGACACTGCCATCTATGGCTGCTTCATCGTCATCTTCGTCTTCCAAAAAACACGATGTTTTTATCAGTTTTAGAGGCGAGGACACACGCAACAACTTCACAAGCCATCTTTGTGCTGCTCTTAACCAAAGCAAGATACAAGTCTTCATAGACAACAGAATTTCCAAGGGAGATGAGAACTCTTCCTCAATCTTCAAAGCCATAAGAGATTCCAATGTGTCCGTGGTTGTTCTGTCAAAGGACTACGCTTCCTCGACGTGGTGCATGCGTGAACTCACAAAAATACTCGAGCAAAAGAGACATGGTAAGGGCCACATTGTGGTACCTGTGTTCTATAAGATTGACCCTTCACATGTTAGGAAGCAAATTGGCACTTACAAGAAAGCATTTGAGAAACATGAGAGAGATGTCAAACACAACATTCTGCTGAAATGGAAAGCTGCTCTCACTGAAGTAGCCAATTTAGTTGGGTGGGATTCACAGAATTACAGGATCGAATCTGAACTCGTTGAGGAAGTTGTCAAAGATGTTATGCAAAAACTGAATTGCATATATCCCCCTGAAGTGAAAGATCTTGTTGGAATTGACCAAAATCTTGCTCCCATTAAATCCTTGTTGAGAATCAGGTCAAGAGAAGTTCGAATAATAGGAATTTGGGGCATGGGCGGAATAGGTAAAACAACCATTGCCAAAGCCTTGTTTTCCAAACTATCTTCTCAATATGAAGGTAGCTGCTTCTTGGAGAATGTAAGGGAAGAATCAGAACAGCATTTGCTGAATAAACTTCTTTCTGAGGCACTAGAGGATGCAAATCACTATTTCGGCACACCTATAGCAAGATCCACCTTTGTTATGAGGAGGCTTAGCCGAAAAAAGGTGTTAATAGTGCTTGATGATGTTGACAATCTGAAGAAGCTCGAAGATCTTGCTGCAAAACATAATTTCTTGGGACCAGGCAGTAGAGTCATTGTCACGACTAGAGATAAGCATGTCCTTAGCAAAGGGGTCGATGAAATATACGAGGTCAAAGGATTGCCCCTTCATCATGCTATTCAGCTTTTTAGTTTAAATGCCTTTGACAAAAGCTATCCTGAATCAGGTTTTGTGATGCTATCTAAAATGGTGGTTGATTATGCAAATGGCAATCCATTGGCTTTAAAAGTTTTAGGCTCATTCCTTCATTCTAGAAATCTGCAACAATGGAACAGTGCTCTGAGAAAACTCACAAAASTTCCAAATACYGAGATTCAGAATGTGTTGAGGTGGAGTTATGATGGATTAGATGATGATGAACAGAAGAATATGTTTCTGGACATTGCATGCTTTTTCCAAGGAGAGAAGAAAGAAACTGTTACAKGGCTACTTGATATTTGTGGTTTCTATGCAGATATTGGGATAAGAATCCTGCAGGACAAAGCTCTAATAACATTTTCAGATGCAAATGAATTACACATGCATGATTTGATACAAGAAATGGGTTTGGAAATTGTTCGTCAGGAATCAACCAAAGACCCTGGAAGGCGCAGCCGGTTGTGGGATCCCGAGGAAATCTATGATTTACTGAAAAATGATAGGGGAAGTGATGCAGTTGAAGGCATAATGTTAGATGTGTCTCAAATAAGAGTCTTGAACTTGAGCTATGAGAGCTTCTCAAGGATGACCAGTCTAAGATTCATCAAATTCTATATGGGTAGGGGTAGGACATGCAATCTGTTCCTTCTTTCAGATGGATACCCTTCCAAGTCTTTGCCATCGACCTTTTCTCCGGACAACCTTGTTGTGCTTTCCATGATGGGAAGCCATGTTGAAAAACTATGGGATGGAGTTAAGAGTCTTCCAYGCTTGAAAGAGATCAACCTTCGCGCCTGCAGCAATTTAACCAATCTCCCCGACTTATCTCTAGCGCCAAATCTTGAAAGGGTAGATCTTTCTCTTTGTACAAGTCTGCTTTGTGTTCCCACATCTATCAAGTATACCAACAAACTTCTTTTGTTTAACCTGGAATCCTGCAAAAATCTGAAGAGTCTTCCAAGAAACATTCACTTATTTTCTCTTCAAATGTTCATTCTCAAAGGCTGTTCAAGTCTTGATGAGTTTTCATTGACTTCAGAGAACATGACACGCCTGGACTTAAGAGGGACYGATATTGAACATTTTCCAGAATCACTTTGGCAACTTCTTAACCAGCTGGTTTACTTGAATCTGGAATCCTGTGCTAAGCTTAAGAGTCTCACAAGCAACATTCACTTGGTATCTCTACAAAGGCTCAATCTTAGAGATTGTTCAAGCCTTGAAGTTTTCTCTGTGACTTCAGAGAACATGGAATACCTGAATTTGGGAGGAACATCAATCAAAGGATTGCCAACATCAATTTGGCGAAACAATAAGCTTTTTACTTTGGTTCTTCATTCCTGTAAAAGACTTGTGAATTTTCCAGACAAGCCGAAACTTGGTGAATTGTCTCTTACTTTCAATGAGAAAAACTCTTTTGAAGGTCCAACTGTGGATGAACCATGGAATTTGTCATCCTTATCAGATTTATCACTGAAAGGAAGCGGTATTGTGAACTTACCTGCAAGCATCAAAGATCTTCCAAGACTGAAAAAACTTACCTTGATGGATTGCAAGAAGCTTCGGTCTCTACCAAGCCTTCCATCATCTTTGGAAGACTTATCCCTTGATGAAAGAAATATTGATTTTTTACCTGTAAATATCAAAGATCTTTCTCATTTGAAAAAGCTTACCATAATTAACAAGAAGAGGCAGTTTTCTCCACCGGAGCTTCCACCATCCTTGAAAGATATATTCCTAAATGAAAGTAAAGTTGATTCCTTGCTTCTGAGCATGAAAGATCTTTCTCATCCACAAAAGTTTCCTCTGATAAAGTGTAACTGGCTTCATCCTCTACTTGAGTTTCCGCCATGTTTGGAAGATTTATCAATAAATGAAAGCAATATTGAGTGCCTGCCAGTTAGCATAAAAGATCTTTCTCACCTGAGAAAACTATCCTTAATAGAGTGCCAGAGGCTTCGGTACTTGCCAGAGCTTCCCCGATCTTTAGAACATCTGTCTGTAAATGGCTGTAACATTGAGAGCTTGCCAAGGAACATCAAAGATCTTTCTCATTTGCAAACCATTACCTTAGTCGATTGCAAGAGGCTCCGGTCTGTACCAGAACTTCCACCATGCCTGCAATCTTTTTGTGCAGCAGATTGCAGATCACTTGAGATTGTTCCAAGTTCAAAGACTATCTTGATGGAAGAGAGGATTGCCTTTTATTACAATTGCATAAACTTGGATCAGAATTCGCGCAACAACATCATTGCAGATGCCCCCTTCGAGGCAGCTTTTGCTTCCTTGAAAGAAAGAACACCTCTTGGTCCTTTGATATCCATATGTCTGCCAGGAATTGAAATCCCAGACTGGTTCAGCTACCAAACACCGAATTCTGCATTGAACATAGAAATTCCTCAACGGTGGTTCATTGATTCGAAGTTCTTAGGCTTTGCTCTATGCCTTGTAATTGGTGGTTCTCATCAAAACAGCAACGAAGGCTATGATCCAGATATTAATTGTTATCACTTTGTAAAGCCTGCTGGCAACTCTGATCCCAATGATCGCTTTCTTGGACATTGCACAACTATAATGCAGGTGCCGTGGGGTTTCAATTCAGATCATATATTCATATGCTACTATCCAGCTTTCAATGTTCCCATCATGCAAGATTTCAAGGACTTAGCCAAGTACTATGATGCAAACAGCCTGAATCTCAGAGTCATTTTTAAATTTAAGGGTCCATCTCAAAGGTTGGACCTTGTGAAGAAGTGTGGAGTCAGACCACTATTGATTGCTAATACTAAAAGGTTTCACATTGAGACTTGA 3948 0.4007 MLVSSGNSQRHRQISCPPRMAYRTLPSMAASSSSSSSKKHDVFISFRGEDTRNNFTSHLCAALNQSKIQVFIDNRISKGDENSSSIFKAIRDSNVSVVVLSKDYASSTWCMRELTKILEQKRHGKGHIVVPVFYKIDPSHVRKQIGTYKKAFEKHERDVKHNILLKWKAALTEVANLVGWDSQNYRIESELVEEVVKDVMQKLNCIYPPEVKDLVGIDQNLAPIKSLLRIRSREVRIIGIWGMGGIGKTTIAKALFSKLSSQYEGSCFLENVREESEQHLLNKLLSEALEDANHYFGTPIARSTFVMRRLSRKKVLIVLDDVDNLKKLEDLAAKHNFLGPGSRVIVTTRDKHVLSKGVDEIYEVKGLPLHHAIQLFSLNAFDKSYPESGFVMLSKMVVDYANGNPLALKVLGSFLHSRNLQQWNSALRKLTKXPNTEIQNVLRWSYDGLDDDEQKNMFLDIACFFQGEKKETVTXLLDICGFYADIGIRILQDKALITFSDANELHMHDLIQEMGLEIVRQESTKDPGRRSRLWDPEEIYDLLKNDRGSDAVEGIMLDVSQIRVLNLSYESFSRMTSLRFIKFYMGRGRTCNLFLLSDGYPSKSLPSTFSPDNLVVLSMMGSHVEKLWDGVKSLPXLKEINLRACSNLTNLPDLSLAPNLERVDLSLCTSLLCVPTSIKYTNKLLLFNLESCKNLKSLPRNIHLFSLQMFILKGCSSLDEFSLTSENMTRLDLRGTDIEHFPESLWQLLNQLVYLNLESCAKLKSLTSNIHLVSLQRLNLRDCSSLEVFSVTSENMEYLNLGGTSIKGLPTSIWRNNKLFTLVLHSCKRLVNFPDKPKLGELSLTFNEKNSFEGPTVDEPWNLSSLSDLSLKGSGIVNLPASIKDLPRLKKLTLMDCKKLRSLPSLPSSLEDLSLDERNIDFLPVNIKDLSHLKKLTIINKKRQFSPPELPPSLKDIFLNESKVDSLLLSMKDLSHPQKFPLIKCNWLHPLLEFPPCLEDLSINESNIECLPVSIKDLSHLRKLSLIECQRLRYLPELPRSLEHLSVNGCNIESLPRNIKDLSHLQTITLVDCKRLRSVPELPPCLQSFCAADCRSLEIVPSSKTILMEERIAFYYNCINLDQNSRNNIIADAPFEAAFASLKERTPLGPLISICLPGIEIPDWFSYQTPNSALNIEIPQRWFIDSKFLGFALCLVIGGSHQNSNEGYDPDINCYHFVKPAGNSDPNDRFLGHCTTIMQVPWGFNSDHIFICYYPAFNVPIMQDFKDLAKYYDANSLNLRVIFKFKGPSQRLDLVKKCGVRPLLIANTKRFHIET* 1316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0793 1315 Gene3D Ribonuclease Inhibitor 552 794 IPR032675 -
Amo04g0793 1315 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 748 913 - -
Amo04g0793 1315 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 32 747 - -
Amo04g0793 1315 Gene3D - 203 363 IPR027417 -
Amo04g0793 1315 Pfam TIR domain 39 208 IPR000157 GO:0007165
Amo04g0793 1315 SUPERFAMILY L domain-like 507 834 - -
Amo04g0793 1315 SMART till_3 39 177 IPR000157 GO:0007165
Amo04g0793 1315 Pfam C-JID domain 1156 1301 IPR045344 -
Amo04g0793 1315 Gene3D Ribonuclease Inhibitor 795 957 IPR032675 -
Amo04g0793 1315 Gene3D Ribonuclease Inhibitor 962 1109 IPR032675 -
Amo04g0793 1315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 461 IPR027417 -
Amo04g0793 1315 Pfam NB-ARC domain 225 438 IPR002182 GO:0043531
Amo04g0793 1315 SUPERFAMILY Toll/Interleukin receptor TIR domain 30 180 IPR035897 -
Amo04g0793 1315 ProSiteProfiles TIR domain profile. 38 203 IPR000157 GO:0007165
Amo04g0793 1315 Gene3D - 36 202 IPR035897 -
Amo04g0793 1315 PRINTS Disease resistance protein signature 309 323 - -
Amo04g0793 1315 PRINTS Disease resistance protein signature 401 415 - -
Amo04g0793 1315 PRINTS Disease resistance protein signature 884 900 - -
Amo04g0793 1315 PRINTS Disease resistance protein signature 237 252 - -
Amo04g0793 1315 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 748 913 IPR044974 GO:0006952
Amo04g0793 1315 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 747 IPR044974 GO:0006952
Amo04g0793 1315 SUPERFAMILY L domain-like 795 1087 - -
Amo04g0793 1315 Gene3D - 367 450 IPR042197 -
Amo04g0793 1315 Pfam Leucine Rich Repeat 613 632 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0793 Amo-Chr4 25753898 25758270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0793 35 813 WRKY Transcription Factor Family AT4G12020 36.353 1.90e-119 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0793 - - ahf:112742518 2174.05