Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0734 ATGAAAGAGGGTGGTAGGAAGCAGGGTTCAGCCTCACCTTGTGCTGCATGCAAGCTTCTCCGCCGAAGGTGCGCCGCGGATTGCGTCTTTGCGCCGTATTTCCCGGCCGACGAGCCTCACAAGTTTGCAAATGTGCATAAGGTCTTTGGTGCCAGCAATGTCAACAAGATGCTTCAGGAGCTACCAGAGCATCAGAGAGGAGATGCAGTGAGCAGCATGGTGTATGAGGCAAATGCAAGAGTGAGGGACCCTGTTTATGGCTGTGTGGGAGCCATCTCTTCTCTTCAACAACAAATTGATGCGTTGCAAATCCAATTGGCTGTGGCTCAGGCTGAGGCTGTGCATCTCAGGGTGCGCCAGACCCAGACTGCATCCTGCTCTTACTGGACCCAACCCCAAAGCCCAACCAATAGTGCCTCCCCACCCTCCAAGCCCATTTTTGACATCGACATGGGCCTTGACCATACCTCTTATGCAGATTCTATTTTGCTTTGGTTAAATGCTGATATGATAAAGTTAAATAAGAATCGAACTCTAGAAGCATTGGTGGTGATTGAAGGAGCTGCGGTGGAGATCTTTCGCCCGCTTGATTACTTTTGGTTTGCAAAAATAGGGGAAGCTGCGCTTATGGTTGGATTGTGGACTTATTTCTTTGATTATGGCAAAAGGTGTTGTAATGGAGCTCTCTATGTTTTAAATATATGGAAGATGAACTTATTGGCATTACTTAGGTTTTCATAA 741 0.475 MKEGGRKQGSASPCAACKLLRRRCAADCVFAPYFPADEPHKFANVHKVFGASNVNKMLQELPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQIQLAVAQAEAVHLRVRQTQTASCSYWTQPQSPTNSASPPSKPIFDIDMGLDHTSYADSILLWLNADMIKLNKNRTLEALVVIEGAAVEIFRPLDYFWFAKIGEAALMVGLWTYFFDYGKRCCNGALYVLNIWKMNLLALLRFS* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0734 246 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Amo04g0734 246 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Amo04g0734 246 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 146 - -
Amo04g0734 246 Coils Coil 92 119 - -
Amo04g0734 246 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0734 Amo-Chr4 22763951 22768037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0734 1 121 AS2 family AT1G31320 89.256 7.75e-70 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo04g0734 LOB 4.3e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0734 - - gmx:100306560 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1829 14 39734742 39738741 Amo04g0734 04 22763951 22768037 hybridization